RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 BIRC3Q13489 604 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 NCOA4Q13772 614 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 LPIN1Q14693 890 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 TMEM132DQ14C87 1099 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 ZBTB6Q15916 424 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 PTPN21Q16825 1174 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 IQCEQ6IPM2 695 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 PHLDB3Q6NSJ2 640 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 APBB2Q92870 758 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 PPP1R12CQ9BZL4 782 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 SPTLC3Q9NUV7 552 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 DNAJC12Q9UKB3 198 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 GIT1Q9Y2X7 761 aa13.41□□□□□ -0.26
TSEN54-204ENST00000577197 PTPRJQ12913 1337 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 TANC1Q9C0D5 1861 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 TRIM43BA6NCK2 446 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 LACTBL1A8MY62 500 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 EIF3CLB5ME19 914 aaKnown RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 RBAK-RBAKDNI3L0D1 243 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 IPO7O95373 1038 aaKnown RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 VNN1O95497 513 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 ACTN1P12814 892 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 RGS19P49795 217 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 WNT7BP56706 349 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 YWHAEP62258 255 aaKnown RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 KRT83P78385 493 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 C10orf76Q5T2E6 689 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 HGSNATQ68CP4 663 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 TWF2Q6IBS0 349 aaKnown RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 VPS36Q86VN1 386 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 EFCAB13Q8IY85 973 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 FAM71AQ8IYT1 594 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 C7orf61Q8IZ16 206 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 TMEM199Q8N511 208 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 CEP120Q8N960 986 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 OR5B17Q8NGF7 314 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 HELQQ8TDG4 1101 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 DPF3Q92784 378 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 SEMA4DQ92854 862 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 TRIM43Q96BQ3 446 aaPredicted RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 POP1Q99575 1024 aaKnown RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 EIF3CQ99613 913 aaKnown RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 EIF2AQ9BY44 585 aaKnown RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 WNT8AQ9H1J5 351 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 LUC7LQ9NQ29 371 aaKnown RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 FAM105AQ9NUU6 356 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 PADI3Q9ULW8 664 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 UBQLN1Q9UMX0 589 aaKnown RBP13.4□□□□□ -0.26
TSEN54-204ENST00000577197 CNTN6Q9UQ52 1028 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 IPPQ9Y573 584 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 NR2E3Q9Y5X4 410 aa13.4□□□□□ -0.26
TSEN54-204ENST00000577197 UMODL1Q5DID0 1318 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 A0A0U1RQF3 1178 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 KIF2AO00139 706 aaPredicted RBP13.39□□□□□ -0.27
TSEN54-204ENST00000577197 PHACTR2O75167 634 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 RECQL4O94761 1208 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 NDUFA10O95299 355 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 CCDC175P0C221 793 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 FAM163BP0C2L3 166 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 P4HA1P13674 534 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 FGFR4P22455 802 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 CYP2C18P33260 490 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 BPIFB4P59827 614 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
TSEN54-204ENST00000577197 TRPC3Q13507 836 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 RAPGEF1Q13905 1077 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 DRAP1Q14919 205 aaPredicted RBP13.39□□□□□ -0.27
TSEN54-204ENST00000577197 ASIC2Q16515 512 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 ASTE1Q2TB18 679 aaPredicted RBP13.39□□□□□ -0.27
TSEN54-204ENST00000577197 JADE1Q6IE81 842 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 IRF2BP2Q7Z5L9 587 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 LRRC52Q8N7C0 313 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 BEST2Q8NFU1 509 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 CXorf38Q8TB03 319 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 PGBD4Q96DM1 585 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 CCDC42Q96M95 316 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 ZNF830Q96NB3 372 aaPredicted RBP13.39□□□□□ -0.27
TSEN54-204ENST00000577197 MTMR12Q9C0I1 747 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 NIF3L1Q9GZT8 377 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 UBE2TQ9NPD8 197 aaPredicted RBP13.39□□□□□ -0.27
TSEN54-204ENST00000577197 NLRC4Q9NPP4 1024 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 SLC38A7Q9NVC3 462 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 PYCARDQ9ULZ3 195 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 PCDHB2Q9Y5E7 798 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 EPN1Q9Y6I3 576 aaPredicted RBP13.39□□□□□ -0.27
TSEN54-204ENST00000577197 BRCA2P51587 3418 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 ALPK3Q96L96 1907 aa13.39□□□□□ -0.27
TSEN54-204ENST00000577197 MEFVO15553 781 aaPredicted RBP13.38□□□□□ -0.27
TSEN54-204ENST00000577197 CAPN15O75808 1086 aa13.38□□□□□ -0.27
TSEN54-204ENST00000577197 EOMESO95936 686 aa13.38□□□□□ -0.27
TSEN54-204ENST00000577197 CXCL10P02778 98 aa13.38□□□□□ -0.27
TSEN54-204ENST00000577197 PFKMP08237 780 aa13.38□□□□□ -0.27
TSEN54-204ENST00000577197 GHRP10912 638 aa13.38□□□□□ -0.27
TSEN54-204ENST00000577197 PNPLA4P41247 253 aa13.38□□□□□ -0.27
TSEN54-204ENST00000577197 CCL23P55773 120 aa13.38□□□□□ -0.27
TSEN54-204ENST00000577197 RBP5P82980 135 aa13.38□□□□□ -0.27
TSEN54-204ENST00000577197 TFAMQ00059 246 aaKnown RBP13.38□□□□□ -0.27
TSEN54-204ENST00000577197 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
TSEN54-204ENST00000577197 CUL2Q13617 745 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms