RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 R4GN57 208 aa13.34□□□□□ -0.27
CCDC40-210ENST00000573903 PTPN2P17706 415 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 RPL9P32969 192 aaKnown RBP13.33□□□□□ -0.28
CCDC40-210ENST00000573903 MCM4P33991 863 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 MATR3P43243 847 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCDC40-210ENST00000573903 MAGEA9P43362 315 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 SOX4Q06945 474 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-210ENST00000573903 SLC44A4Q53GD3 710 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 XKR4Q5GH76 650 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 SLC8B1Q6J4K2 584 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 ZNF280DQ6N043 979 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 RINT1Q6NUQ1 792 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 RSPO2Q6UXX9 243 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-210ENST00000573903 ZNF461Q8TAF7 563 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 RUSC1Q9BVN2 902 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 CYP4F11Q9HBI6 524 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 PTPRHQ9HD43 1115 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 SPATA6Q9NWH7 488 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-210ENST00000573903 DLGAP2Q9P1A6 1054 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 CNTN3Q9P232 1028 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 ANKFY1Q9P2R3 1169 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 MYO15AQ9UKN7 3530 aa13.33□□□□□ -0.28
CCDC40-210ENST00000573903 CFAP54Q96N23 3096 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 PDCD11Q14690 1871 aaKnown RBP13.32□□□□□ -0.28
CCDC40-210ENST00000573903 ARHGEF37A1IGU5 675 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 PP2D1A8MPX8 630 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 ZNF197O14709 1029 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 SLC16A4O15374 487 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 NCAM2O15394 837 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 LAMTOR5O43504 91 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 ECI2O75521 394 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 SP9P0CG40 484 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 KCNE1P15382 129 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 GUCY2CP25092 1073 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 NOLC1Q14978 699 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC40-210ENST00000573903 CTXN3Q4LDR2 81 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 RILPL1Q5EBL4 403 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 TPGS2Q68CL5 300 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 MCTP1Q6DN14 999 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 ALKAL1Q6UXT8 129 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 PDZD4Q76G19 769 aaPredicted RBP13.32□□□□□ -0.28
CCDC40-210ENST00000573903 ERMP1Q7Z2K6 904 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 DAW1Q8N136 415 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 APPL2Q8NEU8 664 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 MCRS1Q96EZ8 462 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 TMX3Q96JJ7 454 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 CORO1BQ9BR76 489 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 OSBPL6Q9BZF3 934 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
CCDC40-210ENST00000573903 MRPS17Q9Y2R5 130 aaKnown RBP13.32□□□□□ -0.28
CCDC40-210ENST00000573903 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.32□□□□□ -0.28
CCDC40-210ENST00000573903 FAM186AA6NE01 2351 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 PATJQ8NI35 1801 aa13.32□□□□□ -0.28
CCDC40-210ENST00000573903 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-210ENST00000573903 FANCMQ8IYD8 2048 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 NOTCH4Q99466 2003 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 WDR27A2RRH5 827 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 H0YCG3 227 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 KINO60870 393 aaKnown RBP13.31□□□□□ -0.28
CCDC40-210ENST00000573903 TOM1L1O75674 476 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 ABLIM3O94929 683 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 CD2BP2O95400 341 aaKnown RBP13.31□□□□□ -0.28
CCDC40-210ENST00000573903 PLS3P13797 630 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 CPB1P15086 417 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 ATF2P15336 505 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 PROZP22891 400 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 IGFBP6P24592 240 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-210ENST00000573903 MARCKSP29966 332 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-210ENST00000573903 CDC25AP30304 524 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 TOB1P50616 345 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-210ENST00000573903 RAD51AP2Q09MP3 1159 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 ZBTB41Q5SVQ8 909 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 CYP4A22Q5TCH4 519 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 IQCEQ6IPM2 695 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 CD300LGQ6UXG3 332 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 TPRG1Q6ZUI0 275 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 C1orf186Q6ZWK4 172 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 TAS1R3Q7RTX0 852 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 KCTD17Q8N5Z5 321 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 BICD1Q96G01 975 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 BORCS6Q96GS4 357 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 ZMAT2Q96NC0 199 aaKnown RBP13.31□□□□□ -0.28
CCDC40-210ENST00000573903 NELL2Q99435 816 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 DDX23Q9BUQ8 820 aaKnown RBP13.31□□□□□ -0.28
CCDC40-210ENST00000573903 LTB4R2Q9NPC1 389 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.31□□□□□ -0.28
CCDC40-210ENST00000573903 INSL5Q9Y5Q6 135 aa13.31□□□□□ -0.28
CCDC40-210ENST00000573903 FAM170BA6NMN3 283 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 SFI1A8K8P3 1242 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 CLDN3O15551 220 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 LRRN2O75325 713 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 GLULP15104 373 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 CEBPBP17676 345 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 MAPK7Q13164 816 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 SLC5A9Q2M3M2 681 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 ZNF528Q3MIS6 628 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 ZPBP2Q6X784 338 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 ZNF852Q6ZMS4 543 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 TCEAL8Q8IYN2 117 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms