RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 LIMD1Q9UGP4 676 aa18.9■□□□□ 0.62
SMG6-212ENST00000573153 HCN4Q9Y3Q4 1203 aa18.9■□□□□ 0.62
SMG6-212ENST00000573153 STYXL1Q9Y6J8 313 aa18.9■□□□□ 0.62
SMG6-212ENST00000573153 FRMD3A2A2Y4 597 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 CLDN3O15551 220 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 FAM13AO94988 1023 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 CLTAP09496 248 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 LRPAP1P30533 357 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 ABCD1P33897 745 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 AARSP49588 968 aaKnown RBP eCLIP18.89■□□□□ 0.61
SMG6-212ENST00000573153 SPAG1Q07617 926 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 E2F4Q16254 413 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 SLC8B1Q6J4K2 584 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 POTEHQ6S545 545 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 SFR1Q86XK3 245 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 KRI1Q8N9T8 703 aaKnown RBP18.89■□□□□ 0.61
SMG6-212ENST00000573153 RASSF8Q8NHQ8 419 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 SLC38A7Q9NVC3 462 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 EPS15L1Q9UBC2 864 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 CPSF3Q9UKF6 684 aaKnown RBP18.89■□□□□ 0.61
SMG6-212ENST00000573153 ZDBF2Q9HCK1 2354 aa18.89■□□□□ 0.61
SMG6-212ENST00000573153 TSC2P49815 1807 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 PPEF2O14830 753 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 POU2F2P09086 479 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 ADSSP30520 456 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 HOXA9P31269 272 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 OR1D2P34982 312 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 VCPP55072 806 aaKnown RBP18.88■□□□□ 0.61
SMG6-212ENST00000573153 KCNA1Q09470 495 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 PKP1Q13835 747 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 IER5LQ5T953 404 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 ZNF720Q7Z2F6 126 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 PLCD3Q8N3E9 789 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 DDX12PQ92771 950 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 SUSD3Q96L08 255 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 CDY1Q9Y6F8 540 aa18.88■□□□□ 0.61
SMG6-212ENST00000573153 LACTBL1A8MY62 500 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 HNRNPDLO14979 420 aaKnown RBP18.87■□□□□ 0.61
SMG6-212ENST00000573153 OGTO15294 1046 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 C8AP07357 584 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 RPL9P32969 192 aaKnown RBP18.87■□□□□ 0.61
SMG6-212ENST00000573153 TXLNAP40222 546 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 LIG4P49917 911 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 GUCY2FP51841 1108 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 CASP5P51878 434 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 NTHL1P78549 312 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 ROR1Q01973 937 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 MTMR3Q13615 1198 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 VARS2Q5ST30 1063 aaKnown RBP18.87■□□□□ 0.61
SMG6-212ENST00000573153 CRELD2Q6UXH1 353 aaPredicted RBP18.87■□□□□ 0.61
SMG6-212ENST00000573153 OTOP3Q7RTS5 596 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 DYMQ7RTS9 669 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 PRSS33Q8NF86 280 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 ZNF396Q96N95 335 aaPredicted RBP18.87■□□□□ 0.61
SMG6-212ENST00000573153 PLEKHA5Q9HAU0 1116 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 DPP7Q9UHL4 492 aa18.87■□□□□ 0.61
SMG6-212ENST00000573153 WDR27A2RRH5 827 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 NRG2O14511 850 aaPredicted RBP18.86■□□□□ 0.61
SMG6-212ENST00000573153 SYN3O14994 580 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 PPP6R2O75170 966 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 ABLIM3O94929 683 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 VNN2O95498 520 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 YEATS4O95619 227 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 ZSCAN22P10073 491 aaPredicted RBP18.86■□□□□ 0.61
SMG6-212ENST00000573153 WNT7BP56706 349 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 AXDND1Q5T1B0 1012 aaPredicted RBP18.86■□□□□ 0.61
SMG6-212ENST00000573153 RRAGBQ5VZM2 374 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 PDXDC1Q6P996 788 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 CCDC73Q6ZRK6 1079 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 ANKS3Q6ZW76 656 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 UBALD2Q8IYN6 164 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 FBXL6Q8N531 539 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 RSAD2Q8WXG1 361 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 PBXIP1Q96AQ6 731 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 KCNK12Q9HB15 430 aa18.86■□□□□ 0.61
SMG6-212ENST00000573153 M0QZQ0 153 aa18.85■□□□□ 0.61
SMG6-212ENST00000573153 TBCAO75347 108 aaKnown RBP18.85■□□□□ 0.61
SMG6-212ENST00000573153 HNRNPA1P09651 372 aaKnown RBP eCLIP18.85■□□□□ 0.61
SMG6-212ENST00000573153 CYP3A5P20815 502 aa18.85■□□□□ 0.61
SMG6-212ENST00000573153 ATL3Q6DD88 541 aa18.85■□□□□ 0.61
SMG6-212ENST00000573153 ZSWIM2Q8NEG5 633 aa18.85■□□□□ 0.61
SMG6-212ENST00000573153 SLC7A14Q8TBB6 771 aa18.85■□□□□ 0.61
SMG6-212ENST00000573153 FBXL5Q9UKA1 691 aa18.85■□□□□ 0.61
SMG6-212ENST00000573153 SPDYE4A6NLX3 237 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 ANHXE9PGG2 379 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 SPTLC2O15270 562 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 NARSO43776 548 aaKnown RBP18.84■□□□□ 0.61
SMG6-212ENST00000573153 SEC24AO95486 1093 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 KRT18P05783 430 aaKnown RBP18.84■□□□□ 0.61
SMG6-212ENST00000573153 HSP90AA1P07900 732 aaKnown RBP18.84■□□□□ 0.61
SMG6-212ENST00000573153 NFICP08651 508 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 STK38Q15208 465 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 KYAT1Q16773 422 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 SPATA1Q5VX52 437 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 SHC4Q6S5L8 630 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 GRASPQ7Z6J2 395 aaPredicted RBP18.84■□□□□ 0.61
SMG6-212ENST00000573153 ACSF2Q96CM8 615 aaPredicted RBP18.84■□□□□ 0.61
SMG6-212ENST00000573153 BICD1Q96G01 975 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 MFSD14AQ96MC6 490 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms