RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 TMC5Q6UXY8 1006 aa17.58■□□□□ 0.4
NDE1-205ENST00000572756 CEP57Q86XR8 500 aa17.58■□□□□ 0.4
NDE1-205ENST00000572756 CCDC65Q8IXS2 484 aa17.58■□□□□ 0.4
NDE1-205ENST00000572756 CMASQ8NFW8 434 aaPredicted RBP17.58■□□□□ 0.4
NDE1-205ENST00000572756 HDAC7Q8WUI4 952 aa17.58■□□□□ 0.4
NDE1-205ENST00000572756 NECTIN4Q96NY8 510 aa17.58■□□□□ 0.4
NDE1-205ENST00000572756 LRRC27Q9C0I9 530 aa17.58■□□□□ 0.4
NDE1-205ENST00000572756 RPF1Q9H9Y2 349 aaKnown RBP17.58■□□□□ 0.4
NDE1-205ENST00000572756 MAGEF1Q9HAY2 307 aa17.58■□□□□ 0.4
NDE1-205ENST00000572756 I3L4J1 428 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 TRAPPC3O43617 180 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 GCNT3O95395 438 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 WEE2P0C1S8 567 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 TKTP29401 623 aaKnown RBP17.57■□□□□ 0.4
NDE1-205ENST00000572756 LRPAP1P30533 357 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 PPP2R3AQ06190 1150 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 SPAG1Q07617 926 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 ALCAMQ13740 583 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 PDXDC1Q6P996 788 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 C15orf39Q6ZRI6 1047 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 GPR149Q86SP6 731 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 PALB2Q86YC2 1186 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 RNF135Q8IUD6 432 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 TMEM130Q8N3G9 435 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 LEO1Q8WVC0 666 aaPredicted RBP17.57■□□□□ 0.4
NDE1-205ENST00000572756 KIF12Q96FN5 646 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 RPGRIP1Q96KN7 1286 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 RIPOR3Q96MK2 946 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 ACCSQ96QU6 501 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 TSPAN18Q96SJ8 248 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 C7orf25Q9BPX7 421 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 RHOBTB2Q9BYZ6 727 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 FAM13BQ9NYF5 915 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 MTRRQ9UBK8 725 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 AGO2Q9UKV8 859 aaKnown RBP17.57■□□□□ 0.4
NDE1-205ENST00000572756 PCDHB13Q9Y5F0 798 aa17.57■□□□□ 0.4
NDE1-205ENST00000572756 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.57■□□□□ 0.4
NDE1-205ENST00000572756 DOCK6Q96HP0 2047 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 ADAM12O43184 909 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 CYP3A5P20815 502 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 ACOT2P49753 483 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 KRT85P78386 507 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 AMPD3Q01432 767 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 POU5F1Q01860 360 aaKnown RBP17.56■□□□□ 0.4
NDE1-205ENST00000572756 EHHADHQ08426 723 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 ADALQ6DHV7 355 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 CRELD2Q6UXH1 353 aaPredicted RBP17.56■□□□□ 0.4
NDE1-205ENST00000572756 GLYCTKQ8IVS8 523 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 CD302Q8IX05 232 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 PLEKHA4Q9H4M7 779 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 DPP7Q9UHL4 492 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 KCNH3Q9ULD8 1083 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 UBQLN1Q9UMX0 589 aaKnown RBP17.56■□□□□ 0.4
NDE1-205ENST00000572756 EXOC7Q9UPT5 735 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 MYO10Q9HD67 2058 aa17.56■□□□□ 0.4
NDE1-205ENST00000572756 DCXO43602 365 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 SPATA31D3P0C874 917 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 ASIC1P78348 528 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 BECN1Q14457 450 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 POSTNQ15063 836 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 ATAT1Q5SQI0 421 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 RSPO2Q6UXX9 243 aaPredicted RBP17.55■□□□□ 0.4
NDE1-205ENST00000572756 SPATA31D4Q6ZUB0 917 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 GLIS3Q8NEA6 775 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 POMGNT1Q8WZA1 660 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 HPS3Q969F9 1004 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 SUSD3Q96L08 255 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 SPATA32Q96LK8 384 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 C1QTNF1Q9BXJ1 281 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 C11orf16Q9NQ32 467 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 FBXW11Q9UKB1 542 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 BACE2Q9Y5Z0 518 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 SCN1AP35498 2009 aa17.55■□□□□ 0.4
NDE1-205ENST00000572756 DOCK8Q8NF50 2099 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 SYN3O14994 580 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 TBC1D4O60343 1298 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 RFPL2O75678 378 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 PRPF6O94906 941 aaKnown RBP17.54■□□□□ 0.4
NDE1-205ENST00000572756 ALADP13716 330 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 GARTP22102 1010 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 CMA1P23946 247 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 AARSP49588 968 aaKnown RBP eCLIP17.54■□□□□ 0.4
NDE1-205ENST00000572756 GUCY2FP51841 1108 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 RAB33AQ14088 237 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 MRPL58Q14197 206 aaKnown RBP17.54■□□□□ 0.4
NDE1-205ENST00000572756 SPATA1Q5VX52 437 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 JADE1Q6IE81 842 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 ELMSAN1Q6PJG2 1045 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 CYP26C1Q6V0L0 522 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 ANKS3Q6ZW76 656 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 KREMEN2Q8NCW0 462 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 ZNF707Q96C28 371 aaPredicted RBP17.54■□□□□ 0.4
NDE1-205ENST00000572756 PYM1Q9BRP8 204 aaKnown RBP17.54■□□□□ 0.4
NDE1-205ENST00000572756 ASB7Q9H672 318 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 MUTYHQ9UIF7 546 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 HPSEQ9Y251 543 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 DERAQ9Y315 318 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 NUB1Q9Y5A7 615 aa17.54■□□□□ 0.4
NDE1-205ENST00000572756 CCDC195A0A1B0GUA6 201 aa17.53■□□□□ 0.4
NDE1-205ENST00000572756 SPDYE4A6NLX3 237 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms