RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 FGFR3P22607 806 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 PTENP60484 403 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 EMC2Q15006 297 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 PFKFB3Q16875 520 aaPredicted RBP14.47□□□□□ -0.09
CCDC40-208ENST00000572270 HAUS6Q7Z4H7 955 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 CAMKK1Q8N5S9 505 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 LEMD2Q8NC56 503 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 ZNF461Q8TAF7 563 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 TTC8Q8TAM2 541 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 BICD2Q8TD16 824 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 ZNF512Q96ME7 567 aaPredicted RBP14.47□□□□□ -0.09
CCDC40-208ENST00000572270 GPR88Q9GZN0 384 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 CYP4F11Q9HBI6 524 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 ASAH2Q9NR71 780 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 IGSF10Q6WRI0 2623 aa14.47□□□□□ -0.09
CCDC40-208ENST00000572270 NCANO14594 1321 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 NUP205Q92621 2012 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 H0Y626 953 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 ADAMTS3O15072 1205 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 ZBTB43O43298 467 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 TRIM16O95361 564 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 MYL4P12829 197 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 USP11P51784 963 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 ROR1Q01973 937 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 MXD4Q14582 209 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-208ENST00000572270 CDR2LQ86X02 465 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-208ENST00000572270 GLIS3Q8NEA6 775 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 MTRQ99707 1265 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 INSL5Q9Y5Q6 135 aa14.46□□□□□ -0.09
CCDC40-208ENST00000572270 GOLGA8AA7E2F4 631 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 GOLGA8BA8MQT2 603 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 CDX4O14627 284 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-208ENST00000572270 TRAPPC3O43617 180 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 ATF2P15336 505 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 GJA1P17302 382 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 TKTP29401 623 aaKnown RBP14.45□□□□□ -0.1
CCDC40-208ENST00000572270 GBP1P32455 592 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 QARSP47897 775 aaKnown RBP14.45□□□□□ -0.1
CCDC40-208ENST00000572270 MBTD1Q05BQ5 628 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 FCHO2Q0JRZ9 810 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 TEAD2Q15562 447 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 PKN3Q6P5Z2 889 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 SMC5Q8IY18 1101 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 HS6ST3Q8IZP7 471 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
CCDC40-208ENST00000572270 ADAM32Q8TC27 787 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 DDX27Q96GQ7 796 aaKnown RBP14.45□□□□□ -0.1
CCDC40-208ENST00000572270 GTSE1Q9NYZ3 720 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 ARID2Q68CP9 1835 aa14.45□□□□□ -0.1
CCDC40-208ENST00000572270 HELZ2Q9BYK8 2649 aaKnown RBP14.44□□□□□ -0.1
CCDC40-208ENST00000572270 TMEM189-UBE2V1I3L0A0 370 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 DPYSL4O14531 572 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 PTGESO14684 152 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 B3GAT3O94766 335 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 PRKCBP05771 671 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 ARPP19P56211 112 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 SIM1P81133 766 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-208ENST00000572270 NUCB1Q02818 461 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 AMHR2Q16671 573 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 Q4G0T1 1027 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 ARHGAP29Q52LW3 1261 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 B3GNT9Q6UX72 402 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 CYP2U1Q7Z449 544 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 IFNLR1Q8IU57 520 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-208ENST00000572270 TCEAL8Q8IYN2 117 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 BBC3Q96PG8 261 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-208ENST00000572270 HHIPQ96QV1 700 aa14.44□□□□□ -0.1
CCDC40-208ENST00000572270 KIF26AQ9ULI4 1882 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-208ENST00000572270 MAST4O15021 2626 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 SPAARA0A1B0GVQ0 90 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 DCLK1O15075 740 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 SGSM2O43147 1006 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 B4GALT5O43286 388 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 MOSPD3O75425 235 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 ABLIM3O94929 683 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 CHMLP26374 656 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 POU5F1BQ06416 359 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 C19orf57Q0VDD7 668 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 GRSF1Q12849 480 aaKnown RBP eCLIP14.43□□□□□ -0.1
CCDC40-208ENST00000572270 PTPAQ15257 358 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 SLC8B1Q6J4K2 584 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 OTUD6AQ7L8S5 288 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 C11orf74Q86VG3 221 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 ZFYVE19Q96K21 471 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 TMEM209Q96SK2 561 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 RWDD1Q9H446 243 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-208ENST00000572270 SNTG2Q9NY99 539 aa14.43□□□□□ -0.1
CCDC40-208ENST00000572270 A0A1B0GUA9 196 aa14.42□□□□□ -0.1
CCDC40-208ENST00000572270 P4HBP07237 508 aaKnown RBP14.42□□□□□ -0.1
CCDC40-208ENST00000572270 EPHA5P54756 1037 aa14.42□□□□□ -0.1
CCDC40-208ENST00000572270 SCAPQ12770 1279 aa14.42□□□□□ -0.1
CCDC40-208ENST00000572270 TWF1Q12792 350 aa14.42□□□□□ -0.1
CCDC40-208ENST00000572270 LMAN2Q12907 356 aa14.42□□□□□ -0.1
CCDC40-208ENST00000572270 XKR9Q5GH70 373 aa14.42□□□□□ -0.1
CCDC40-208ENST00000572270 CCDC148Q8NFR7 591 aa14.42□□□□□ -0.1
CCDC40-208ENST00000572270 RSPRY1Q96DX4 576 aa14.42□□□□□ -0.1
CCDC40-208ENST00000572270 SLKQ9H2G2 1235 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-208ENST00000572270 FAM221BA6H8Z2 402 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 PATE3B3GLJ2 98 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 RECQL4O94761 1208 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms