RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 KCNH3Q9ULD8 1083 aa16.19■□□□□ 0.18
NDE1-203ENST00000570727 ARHGEF37A1IGU5 675 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 GLULP15104 373 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 RFX1P22670 979 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 ATP2C1P98194 919 aaPredicted RBP16.18■□□□□ 0.18
NDE1-203ENST00000570727 ROR1Q01973 937 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 SLC10A6Q3KNW5 377 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 PABPC1LQ4VXU2 614 aaKnown RBP16.18■□□□□ 0.18
NDE1-203ENST00000570727 SPECC1Q5M775 1068 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 VARS2Q5ST30 1063 aaKnown RBP16.18■□□□□ 0.18
NDE1-203ENST00000570727 MTSS1LQ765P7 747 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 NPAS3Q8IXF0 933 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 SYT2Q8N9I0 419 aaPredicted RBP16.18■□□□□ 0.18
NDE1-203ENST00000570727 TMEM161BQ8NDZ6 487 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 SPIRE2Q8WWL2 714 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 TCHPQ9BT92 498 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 TIPINQ9BVW5 301 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 FOXQ1Q9C009 403 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 GVINP1Q7Z2Y8 2422 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 COL4A3Q01955 1670 aa16.18■□□□□ 0.18
NDE1-203ENST00000570727 WDR27A2RRH5 827 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 LRRN2O75325 713 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 RHOP08100 348 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 PLS3P13797 630 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 RPL9P32969 192 aaKnown RBP16.17■□□□□ 0.18
NDE1-203ENST00000570727 SLC12A3P55017 1021 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 RAD51AP2Q09MP3 1159 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 SNW1Q13573 536 aaKnown RBP16.17■□□□□ 0.18
NDE1-203ENST00000570727 ZRSR1Q15695 479 aaKnown RBP16.17■□□□□ 0.18
NDE1-203ENST00000570727 SLC5A9Q2M3M2 681 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 SEZ6Q53EL9 994 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 SLC44A4Q53GD3 710 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 RILPL1Q5EBL4 403 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 MCTP1Q6DN14 999 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 ADSSL1Q8N142 457 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 PJA1Q8NG27 643 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 ING5Q8WYH8 240 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 PLIN2Q99541 437 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 KXD1Q9BQD3 176 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 DDX23Q9BUQ8 820 aaKnown RBP16.17■□□□□ 0.18
NDE1-203ENST00000570727 HAPLN2Q9GZV7 340 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 AVENQ9NQS1 362 aaPredicted RBP16.17■□□□□ 0.18
NDE1-203ENST00000570727 FANCMQ8IYD8 2048 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 MIA3Q5JRA6 1907 aa16.17■□□□□ 0.18
NDE1-203ENST00000570727 EP300Q09472 2414 aaPredicted RBP16.17■□□□□ 0.18
NDE1-203ENST00000570727 SYN3O14994 580 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 TOM1L1O75674 476 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 SEC24AO95486 1093 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 MAPTP10636 758 aaKnown RBP16.16■□□□□ 0.18
NDE1-203ENST00000570727 HARSP12081 509 aaKnown RBP16.16■□□□□ 0.18
NDE1-203ENST00000570727 ATF2P15336 505 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 ARSHQ5FYA8 562 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 TMEM130Q8N3G9 435 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 KCTD17Q8N5Z5 321 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 MCRS1Q96EZ8 462 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 SHDQ96IW2 340 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 SUSD3Q96L08 255 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 PLA2G2FQ9BZM2 168 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 FBXL5Q9UKA1 691 aa16.16■□□□□ 0.18
NDE1-203ENST00000570727 MRPS23Q9Y3D9 190 aaKnown RBP16.16■□□□□ 0.18
NDE1-203ENST00000570727 MTF2Q9Y483 593 aaPredicted RBP16.16■□□□□ 0.18
NDE1-203ENST00000570727 NPHP3-ACAD11A0A0J9YXS1 232 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 PLA2G4BP0C869 781 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 SP9P0CG40 484 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 PTPN2P17706 415 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 ELF1P32519 619 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 ARPP19P56211 112 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 STRN3Q13033 797 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 RABEP1Q15276 862 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 ZPBP2Q6X784 338 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 C1orf210Q8IVY1 113 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 TCEAL8Q8IYN2 117 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 MAML2Q8IZL2 1156 aaPredicted RBP16.15■□□□□ 0.18
NDE1-203ENST00000570727 TMX3Q96JJ7 454 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 TBC1D32Q96NH3 1257 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 KCNG1Q9UIX4 513 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 R4GN57 208 aa16.15■□□□□ 0.18
NDE1-203ENST00000570727 KANSL1LA0AUZ9 987 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 VWA3AA6NCI4 1184 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 H7C4K7 107 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 NRG2O14511 850 aaPredicted RBP16.14■□□□□ 0.17
NDE1-203ENST00000570727 ECI2O75521 394 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 CD2BP2O95400 341 aaKnown RBP16.14■□□□□ 0.17
NDE1-203ENST00000570727 CEBPBP17676 345 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 SMTNP53814 917 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
NDE1-203ENST00000570727 PRKCQQ04759 706 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 MCL1Q07820 350 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 NOLC1Q14978 699 aaKnown RBP eCLIP16.14■□□□□ 0.17
NDE1-203ENST00000570727 MLF2Q15773 248 aaPredicted RBP16.14■□□□□ 0.17
NDE1-203ENST00000570727 ZBTB6Q15916 424 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 TMEM119Q4V9L6 283 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 PRSS36Q5K4E3 855 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 ARL6IP4Q66PJ3 421 aaKnown RBP16.14■□□□□ 0.17
NDE1-203ENST00000570727 TANGO2Q6ICL3 276 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 LRRC15Q8TF66 581 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 DDX12PQ92771 950 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 TCEAL4Q96EI5 215 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 SEMA4AQ9H3S1 761 aa16.14■□□□□ 0.17
NDE1-203ENST00000570727 CYP4F11Q9HBI6 524 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms