RNA–Protein interactions for RNA: ENST00000570124.1

SIN3A-215, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-215ENST00000570124 MLC1Q15049 377 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 STK38Q15208 465 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 LRRC41Q15345 812 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 DHCR24Q15392 516 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 BBS9Q3SYG4 887 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 SPECC1Q5M775 1068 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 WIPI1Q5MNZ9 446 aaPredicted RBP5.9□□□□□ -1.46
SIN3A-215ENST00000570124 SHISA2Q6UWI4 295 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 B3GNT9Q6UX72 402 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 USP49Q70CQ1 688 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 NIPA1Q7RTP0 329 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 C14orf80Q86SX3 495 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 SPATS2Q86XZ4 545 aaKnown RBP5.9□□□□□ -1.46
SIN3A-215ENST00000570124 SCUBE1Q8IWY4 988 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 MSL3Q8N5Y2 521 aaKnown RBP5.9□□□□□ -1.46
SIN3A-215ENST00000570124 RAET1EQ8TD07 263 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 LRRC15Q8TF66 581 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 LEO1Q8WVC0 666 aaPredicted RBP5.9□□□□□ -1.46
SIN3A-215ENST00000570124 KISS1RQ969F8 398 aaPredicted RBP5.9□□□□□ -1.46
SIN3A-215ENST00000570124 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.46
SIN3A-215ENST00000570124 UNC45AQ9H3U1 944 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 ABHD16BQ9H3Z7 469 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 TTC12Q9H892 705 aaPredicted RBP5.9□□□□□ -1.46
SIN3A-215ENST00000570124 RAD18Q9NS91 495 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 GMIPQ9P107 970 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 FBXO2Q9UK22 296 aaPredicted RBP5.9□□□□□ -1.46
SIN3A-215ENST00000570124 RCOR1Q9UKL0 485 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 VAV3Q9UKW4 847 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 PCDHA7Q9UN72 937 aa5.9□□□□□ -1.46
SIN3A-215ENST00000570124 A0A087WWV3 80 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 TRBV23-1A0A0A0MS06 115 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 GSTTP1A0A1W2PQM5 241 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 VWA3AA6NCI4 1184 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 MYADML2A6NDP7 307 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 RBAK-RBAKDNI3L0D1 243 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SPTLC2O15270 562 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 PPP6R2O75170 966 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 RFPL1O75677 317 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 STAM2O75886 525 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 YEATS4O95619 227 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 GGPS1O95749 300 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 HMGCRP04035 888 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 OR52Z1P0C646 297 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SELPP16109 830 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 GCFC2P16383 781 aaKnown RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 HOXD10P28358 340 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 CDC25AP30304 524 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 GRK4P32298 578 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SUMO1P63165 101 aaKnown RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 KRT85P78386 507 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SLC7A5Q01650 507 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 ARHGAP1Q07960 439 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 CBX2Q14781 532 aaPredicted RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 GRIK4Q16099 956 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 CALCRLQ16602 461 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 HSDL1Q3SXM5 330 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 MAP3K21Q5TCX8 1036 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 LRCH2Q5VUJ6 765 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 CXorf57Q6NSI4 855 aaKnown RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 KIAA1211LQ6NV74 962 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 XRRA1Q6P2D8 792 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 LRFN4Q6PJG9 635 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SHC4Q6S5L8 630 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 IGF2-ASQ6U949 168 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 CLEC17AQ6ZS10 378 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 CYFIP1Q7L576 1253 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 NLRX1Q86UT6 975 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 IGSF22Q8N9C0 903 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 PPP1R13LQ8WUF5 828 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 DDX1Q92499 740 aaKnown RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 ELMO3Q96BJ8 720 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 PLPPR2Q96GM1 343 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SCARF2Q96GP6 870 aaPredicted RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SLC39A13Q96H72 371 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 ZNF396Q96N95 335 aaPredicted RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SMAD5Q99717 465 aaKnown RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 ZNF577Q9BSK1 485 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 RNF208Q9H0X6 261 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 CSRNP2Q9H175 543 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 VTA1Q9NP79 307 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 ZHX1Q9UKY1 873 aaPredicted RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 POLR3KQ9Y2Y1 108 aaPredicted RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SRPRBQ9Y5M8 271 aaKnown RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 NFASCO94856 1347 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 MTCL1Q9Y4B5 1905 aaKnown RBP5.89□□□□□ -1.47
SIN3A-215ENST00000570124 SCN1AP35498 2009 aa5.89□□□□□ -1.47
SIN3A-215ENST00000570124 TNRC18O15417 2968 aaPredicted RBP5.88□□□□□ -1.47
SIN3A-215ENST00000570124 TSC2P49815 1807 aa5.88□□□□□ -1.47
SIN3A-215ENST00000570124 VWA8A3KMH1 1905 aa5.88□□□□□ -1.47
SIN3A-215ENST00000570124 DENND4CQ5VZ89 1909 aa5.88□□□□□ -1.47
SIN3A-215ENST00000570124 ZNF638Q14966 1978 aaKnown RBP5.88□□□□□ -1.47
SIN3A-215ENST00000570124 DCDC2CA8MYV0 355 aa5.88□□□□□ -1.47
SIN3A-215ENST00000570124 B4DLN1 442 aa5.88□□□□□ -1.47
SIN3A-215ENST00000570124 TBX3O15119 743 aa5.88□□□□□ -1.47
SIN3A-215ENST00000570124 GPR39O43194 453 aa5.88□□□□□ -1.47
SIN3A-215ENST00000570124 CHMP2AO43633 222 aa5.88□□□□□ -1.47
SIN3A-215ENST00000570124 NRDCO43847 1150 aa5.88□□□□□ -1.47
SIN3A-215ENST00000570124 FARP2O94887 1054 aaPredicted RBP5.88□□□□□ -1.47
SIN3A-215ENST00000570124 HTR3BO95264 441 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms