RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 LAPTM5Q13571 262 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 PKN1Q16512 942 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 INF2Q27J81 1249 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 C12orf60Q5U649 245 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 MBLAC2Q68D91 279 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 CYP2R1Q6VVX0 501 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 IFNL3Q8IZI9 196 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 STK11IPQ8N1F8 1099 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 FAM133AQ8N9E0 248 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 RCBTB1Q8NDN9 531 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 SSH3Q8TE77 659 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 SDR42E1Q8WUS8 393 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 EAF2Q96CJ1 260 aaPredicted RBP7.04□□□□□ -1.28
UBFD1-209ENST00000569919 FCRL2Q96LA5 508 aaPredicted RBP7.04□□□□□ -1.28
UBFD1-209ENST00000569919 TGS1Q96RS0 853 aaKnown RBP7.04□□□□□ -1.28
UBFD1-209ENST00000569919 RAD9AQ99638 391 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 SLC38A10Q9HBR0 1119 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 RAVER2Q9HCJ3 691 aaKnown RBP7.04□□□□□ -1.28
UBFD1-209ENST00000569919 NYAP2Q9P242 653 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 FEM1BQ9UK73 627 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 SLC5A6Q9Y289 635 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 PCDHA8Q9Y5H6 950 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 CHD7Q9P2D1 2997 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 TCRBV16S1A1N1A0A5B0 115 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 OPA1O60313 960 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 KPNA6O60684 536 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 MED26O95402 600 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 ASLP04424 464 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 CD8BP10966 210 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 IL9P15248 144 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 PDE6AP16499 860 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 IGBP1P78318 339 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 ZNF460Q14592 562 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 BRDTQ58F21 947 aaPredicted RBP7.03□□□□□ -1.28
UBFD1-209ENST00000569919 TAPT1Q6NXT6 567 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 NFRKBQ6P4R8 1299 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 SPRED2Q7Z698 418 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 TRMT2AQ8IZ69 625 aaKnown RBP7.03□□□□□ -1.28
UBFD1-209ENST00000569919 NEK9Q8TD19 979 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.03□□□□□ -1.28
UBFD1-209ENST00000569919 CHAC2Q8WUX2 184 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 DDX1Q92499 740 aaKnown RBP7.03□□□□□ -1.28
UBFD1-209ENST00000569919 MTG1Q9BT17 334 aaPredicted RBP7.03□□□□□ -1.28
UBFD1-209ENST00000569919 ACAD9Q9H845 621 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 CAAP1Q9H8G2 361 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 TRMT13Q9NUP7 481 aaKnown RBP7.03□□□□□ -1.28
UBFD1-209ENST00000569919 PCDHA2Q9Y5H9 948 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 PARP14Q460N5 1801 aa7.03□□□□□ -1.28
UBFD1-209ENST00000569919 ZNF532Q9HCE3 1301 aa7.02□□□□□ -1.28
UBFD1-209ENST00000569919 REV3LO60673 3130 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 ABHD14A-ACY1A0A1B0GW23 586 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 NCK2O43639 380 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 BCAR3O75815 825 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 NAT1P18440 290 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 IGFALSP35858 605 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 CPT1AP50416 773 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 RARSP54136 660 aaKnown RBP7.02□□□□□ -1.29
UBFD1-209ENST00000569919 ANAPC15P60006 121 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 PURAQ00577 322 aaKnown RBP7.02□□□□□ -1.29
UBFD1-209ENST00000569919 ZP2Q05996 745 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 DUSP28Q4G0W2 176 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 HLA-DQA1Q5Y7H0 255 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 BMP8AQ7Z5Y6 402 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 MTDHQ86UE4 582 aaKnown RBP7.02□□□□□ -1.29
UBFD1-209ENST00000569919 ADHFE1Q8IWW8 467 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 RPAP2Q8IXW5 612 aaPredicted RBP7.02□□□□□ -1.29
UBFD1-209ENST00000569919 LCORLQ8N3X6 602 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 UBR7Q8N806 425 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.02□□□□□ -1.29
UBFD1-209ENST00000569919 GDPD5Q8WTR4 605 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 CHURC1Q8WUH1 139 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 NUP88Q99567 741 aaPredicted RBP7.02□□□□□ -1.29
UBFD1-209ENST00000569919 G6PC3Q9BUM1 346 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 ARMT1Q9H993 441 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 VTA1Q9NP79 307 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 PDGFCQ9NRA1 345 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 CLIP2Q9UDT6 1046 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 SYNPO2Q9UMS6 1093 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 MAPRE3Q9UPY8 281 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 TRANK1O15050 2925 aa7.02□□□□□ -1.29
UBFD1-209ENST00000569919 LOC102724159A0A0B4J2E5 919 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 TCRBV5S4A2TA0A5A2 114 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 LCHNA4D1U4 455 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 C7orf72A4D263 438 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 LINC01553A4QN01 128 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 PRKAB2O43741 272 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 GJB5O95377 273 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 NDUFB10O96000 172 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 PRNPP04156 253 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 APPP05067 770 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 MYL3P08590 195 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 ITGB7P26010 798 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 SOX5P35711 763 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 NEK4P51957 841 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 WDR5P61964 334 aaKnown RBP7.01□□□□□ -1.29
UBFD1-209ENST00000569919 PWP2Q15269 919 aaKnown RBP7.01□□□□□ -1.29
UBFD1-209ENST00000569919 FAM47CQ5HY64 1035 aa7.01□□□□□ -1.29
UBFD1-209ENST00000569919 CNKSR3Q6P9H4 555 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms