RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 R3HDMLQ9H3Y0 253 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 FZD8Q9H461 694 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 SLITRK6Q9H5Y7 841 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 AZI2Q9H6S1 392 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 SUGCTQ9HAC7 445 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 PDE11AQ9HCR9 933 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 PTPRHQ9HD43 1115 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 NMRK2Q9NPI5 230 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 AVENQ9NQS1 362 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 UVRAGQ9P2Y5 699 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 MORF4L1Q9UBU8 362 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 GTF3C4Q9UKN8 822 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 HPCAL4Q9UM19 191 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 COG5Q9UP83 839 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 PCDHB2Q9Y5E7 798 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 COL11A1P12107 1806 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 MYH10P35580 1976 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 H3BQF6 201 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 ACKR2O00590 384 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 ABLIM1O14639 778 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 MAGEB2O15479 319 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CLDN3O15551 220 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 SART1O43290 800 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 FAM189A1O60320 539 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 PEX10O60683 326 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 PPFIA4O75335 1185 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 ARIH2O95376 493 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 VNN1O95497 513 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 SYF2O95926 243 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 HLA-DRAP01903 254 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CYP1A1P04798 512 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 MYBL1P10243 752 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 MYBL2P10244 700 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 DLATP10515 647 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CETPP11597 493 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 SKIP12755 728 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 TNNI1P19237 187 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 PROZP22891 400 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 TBXAS1P24557 533 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CTNNA2P26232 953 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 OAS2P29728 719 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 MATR3P43243 847 aaKnown RBP eCLIP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 GCLCP48506 637 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 EPHB4P54760 987 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 NLRP11P59045 1033 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 PTENP60484 403 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 ERVK-9P63128 1117 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 SP4Q02446 784 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 MCL1Q07820 350 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 LAMTOR4Q0VGL1 99 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 PAK2Q13177 524 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CUL1Q13616 776 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CAPSQ13938 189 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 TFDP1Q14186 410 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 TTLL4Q14679 1199 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 FAM187BQ17R55 369 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 EMC10Q5UCC4 262 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 TDRD10Q5VZ19 366 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 TAPT1Q6NXT6 567 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 C8orf74Q6P047 294 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 MAMDC4Q6UXC1 1216 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 DNAJC14Q6Y2X3 702 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 TRMT1LQ7Z2T5 733 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 SLC47A2Q86VL8 602 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 BRSK2Q8IWQ3 736 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 ZBTB8OSQ8IWT0 167 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 UBR7Q8N806 425 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CCDC26Q8TAB7 109 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 WHAMMQ8TF30 809 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 GLG1Q92896 1179 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CD101Q93033 1021 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 TRIM11Q96F44 468 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 ZBTB45Q96K62 511 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 FNBP1Q96RU3 617 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 PSMB7Q99436 277 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 KRT12Q99456 494 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CGRRF1Q99675 332 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 SH3GL2Q99962 352 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 PAGR1Q9BTK6 254 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 MSTO1Q9BUK6 570 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 MRPL4Q9BYD3 311 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF408Q9H9D4 720 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 GBA2Q9HCG7 927 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 ZCCHC17Q9NP64 241 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 OSGEPQ9NPF4 335 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 TOPORSQ9NS56 1045 aaPredicted RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 IGSF5Q9NSI5 407 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 SMARCAL1Q9NZC9 954 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 EHD2Q9NZN4 543 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 CPSF3Q9UKF6 684 aaKnown RBP5.77□□□□□ -1.49
SF3B3-213ENST00000569687 PCDHA3Q9Y5H8 950 aa5.77□□□□□ -1.49
SF3B3-213ENST00000569687 PTPRFP10586 1907 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 CCDC66A2RUB6 948 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 FAM187AA6NFU0 413 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 LRRIQ4A6NIV6 560 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 TMCO5BA8MYB1 307 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 AGPSO00116 658 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 KRIT1O00522 736 aa5.76□□□□□ -1.49
SF3B3-213ENST00000569687 OGTO15294 1046 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms