RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 HOXA9P31269 272 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 FZD5Q13467 585 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SNW1Q13573 536 aaKnown RBP12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 FAM171A1Q5VUB5 890 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 BRAPQ7Z569 592 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 NELL1Q92832 810 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 KXD1Q9BQD3 176 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TTPALQ9BTX7 342 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 KIFC3Q9BVG8 833 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PLA2G2FQ9BZM2 168 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TRIM6Q9C030 488 aaPredicted RBP12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SEMA4AQ9H3S1 761 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TTC12Q9H892 705 aaPredicted RBP12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 DNMT3BQ9UBC3 853 aaKnown RBP12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ORC3Q9UBD5 711 aaPredicted RBP12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PARP2Q9UGN5 583 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PDCD11Q14690 1871 aaKnown RBP12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 NCANO14594 1321 aa12.31□□□□□ -0.44
CHRFAM7A-206ENST00000569278 VPS37CA5D8V6 355 aaPredicted RBP12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 LRRIQ4A6NIV6 560 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 BTBD18B2RXH4 712 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 JAK2O60674 1132 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 HNRNPA1P09651 372 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CD72P21854 359 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 FGFR3P22607 806 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 FCARP24071 287 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 KRT2P35908 639 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CREMQ03060 361 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SOX4Q06945 474 aaPredicted RBP12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 MLF2Q15773 248 aaPredicted RBP12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CALCRLQ16602 461 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 MAEAQ7L5Y9 396 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CATSPER3Q86XQ3 398 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 NOSTRINQ8IVI9 506 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 FBXO18Q8NFZ0 1043 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SLC7A14Q8TBB6 771 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PRIMPOLQ96LW4 560 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PPP1R10Q96QC0 940 aaKnown RBP12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 NAP1L4Q99733 375 aaKnown RBP12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 MTRRQ9UBK8 725 aa12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ZFP37Q9Y6Q3 630 aaPredicted RBP12.3□□□□□ -0.44
CHRFAM7A-206ENST00000569278 KANSL1LA0AUZ9 987 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 GOLGA6L4A6NEF3 574 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TMEM189-UBE2V1I3L0A0 370 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 NEMFO60524 1076 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TADA2AO75478 443 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TDGF1P13385 188 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TGM1P22735 817 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TARSP26639 723 aaKnown RBP12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TXKP42681 527 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 RAB33AQ14088 237 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ECM1Q16610 540 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 GLRA4Q5JXX5 417 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PPM1LQ5SGD2 360 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 DMRTA1Q5VZB9 504 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ELMSAN1Q6PJG2 1045 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TMEM130Q8N3G9 435 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 KCNG4Q8TDN1 519 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ING5Q8WYH8 240 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 GOLGA2P5Q9HBQ8 144 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 LTB4R2Q9NPC1 389 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PRMT7Q9NVM4 692 aaPredicted RBP12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PCDHA12Q9UN75 941 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 LAMA1P25391 3075 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 WDFY3Q8IZQ1 3526 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TICRRQ7Z2Z1 1910 aa12.29□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ASPMQ8IZT6 3477 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 F5P12259 2224 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 I3L4J1 428 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 LILRB5O75023 590 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 NR1I2O75469 434 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CAVIN2O95810 425 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CEBPBP17676 345 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 XBP1P17861 261 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 TKTP29401 623 aaKnown RBP12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CLCNKBP51801 687 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 SLC44A4Q53GD3 710 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PRSS36Q5K4E3 855 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 AXDND1Q5T1B0 1012 aaPredicted RBP12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 NT5DC1Q5TFE4 455 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 LIN9Q5TKA1 542 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CEP57Q86XR8 500 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 DIS3L2Q8IYB7 885 aaKnown RBP12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 HACE1Q8IYU2 909 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CEP120Q8N960 986 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ZBTB44Q8NCP5 570 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 RUBCNQ92622 972 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CLDN23Q96B33 292 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 POLD4Q9HCU8 107 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 PRMT8Q9NR22 394 aaPredicted RBP12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 RCOR1Q9UKL0 485 aa12.28□□□□□ -0.44
CHRFAM7A-206ENST00000569278 CACNA1BQ00975 2339 aa12.27□□□□□ -0.44
CHRFAM7A-206ENST00000569278 ACKR2O00590 384 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ABLIM1O14639 778 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 N4BP3O15049 544 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TBC1D4O60343 1298 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PRKCBP05771 671 aa12.27□□□□□ -0.45
CHRFAM7A-206ENST00000569278 THP07101 528 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms