RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 N4BP3O15049 544 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 ABLIM3O94929 683 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 AMPD2Q01433 879 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 TMEM132AQ24JP5 1023 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 ARHGAP29Q52LW3 1261 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 KBTBD6Q86V97 674 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 ZCCHC14Q8WYQ9 949 aaKnown RBP9.58□□□□□ -0.88
SMG1-216ENST00000569122 GJA10Q969M2 543 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 DDX27Q96GQ7 796 aaKnown RBP9.58□□□□□ -0.88
SMG1-216ENST00000569122 CCDC43Q96MW1 224 aaKnown RBP9.58□□□□□ -0.88
SMG1-216ENST00000569122 PAAF1Q9BRP4 392 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 EDEM2Q9BV94 578 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 SLITRK6Q9H5Y7 841 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 ANKFY1Q9P2R3 1169 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 PCDHA4Q9UN74 947 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 PATJQ8NI35 1801 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 C4orf47A7E2U8 309 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 SPECC1L-ADORA2AF8WAN1 911 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 TAF4O00268 1085 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 ARNTLO00327 626 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 SYN3O14994 580 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 TBX3O15119 743 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 EDIL3O43854 480 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 BAG4O95429 457 aaKnown RBP9.57□□□□□ -0.88
SMG1-216ENST00000569122 TDP2O95551 362 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 FGF19O95750 216 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 CAVIN2O95810 425 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 GCFC2P16383 781 aaKnown RBP9.57□□□□□ -0.88
SMG1-216ENST00000569122 CTHP32929 405 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 VIPR2P41587 438 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 FCHO2Q0JRZ9 810 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 PLD1Q13393 1074 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 CCDC6Q16204 474 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 TSGA10IPQ3SY00 556 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 SH3PXD2AQ5TCZ1 1133 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 ZBTB8OSQ8IWT0 167 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 TRIM22Q8IYM9 498 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 ZNF579Q8NAF0 562 aaKnown RBP9.57□□□□□ -0.88
SMG1-216ENST00000569122 GATA6Q92908 595 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 TCEAL4Q96EI5 215 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 LXNQ9BS40 222 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 SCNM1Q9BWG6 230 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 TMEM121BQ9BXQ6 578 aaPredicted RBP9.57□□□□□ -0.88
SMG1-216ENST00000569122 C2orf40Q9H1Z8 148 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 SLC32A1Q9H598 525 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 ANO2Q9NQ90 1003 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 BMP2KQ9NSY1 1161 aaPredicted RBP9.57□□□□□ -0.88
SMG1-216ENST00000569122 RBM12Q9NTZ6 932 aaKnown RBP9.57□□□□□ -0.88
SMG1-216ENST00000569122 ANKEF1Q9NU02 776 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 THG1LQ9NWX6 298 aaKnown RBP9.57□□□□□ -0.88
SMG1-216ENST00000569122 OBP2AQ9NY56 170 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 WASF3Q9UPY6 502 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 NEUROG3Q9Y4Z2 214 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 INSL5Q9Y5Q6 135 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 FRYQ5TBA9 3013 aa9.57□□□□□ -0.88
SMG1-216ENST00000569122 ZZEF1O43149 2961 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 EIF4E1BA6NMX2 242 aaKnown RBP9.56□□□□□ -0.88
SMG1-216ENST00000569122 SLC38A8A6NNN8 435 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 H0Y626 953 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 EML1O00423 815 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 PTGESO14684 152 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 KHNYNO15037 678 aaKnown RBP9.56□□□□□ -0.88
SMG1-216ENST00000569122 ADAMTS3O15072 1205 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 RECQL4O94761 1208 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 TRIM16O95361 564 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 ARL2P36404 184 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 EPHA5P54756 1037 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 ROR1Q01973 937 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 GRSF1Q12849 480 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMG1-216ENST00000569122 CAPSQ13938 189 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 CCINQ13939 588 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 FAM187BQ17R55 369 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 PLK5Q496M5 336 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 Q6ZS52 159 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 KRT25Q7Z3Z0 450 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 BLIDQ8IZY5 108 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 CCDC26Q8TAB7 109 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 OXCT2Q9BYC2 517 aaPredicted RBP9.56□□□□□ -0.88
SMG1-216ENST00000569122 TMEM9BQ9NQ34 198 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 SLC38A7Q9NVC3 462 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 SNTG2Q9NY99 539 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 VPS54Q9P1Q0 977 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 AFF4Q9UHB7 1163 aaKnown RBP9.56□□□□□ -0.88
SMG1-216ENST00000569122 MSRB2Q9Y3D2 182 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 ZFYVE26Q68DK2 2539 aa9.56□□□□□ -0.88
SMG1-216ENST00000569122 SPEGQ15772 3267 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 LRRIQ4A6NIV6 560 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 B4GALT5O43286 388 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 MYL4P12829 197 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 XRCC6P12956 609 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMG1-216ENST00000569122 IFNAR1P17181 557 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 GLRA2P23416 452 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 TKTP29401 623 aaKnown RBP9.55□□□□□ -0.88
SMG1-216ENST00000569122 ARPP19P56211 112 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 CREB5Q02930 508 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 PON2Q15165 354 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 MAPK6Q16659 721 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 UPP1Q16831 310 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 DCAF4L1Q3SXM0 396 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms