RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 ASTE1Q2TB18 679 aaPredicted RBP8.85□□□□□ -0.99
BBS4-214ENST00000568535 CCDC122Q5T0U0 273 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 LMBRD2Q68DH5 695 aaPredicted RBP8.85□□□□□ -0.99
BBS4-214ENST00000568535 FAM43BQ6ZT52 329 aaPredicted RBP8.85□□□□□ -0.99
BBS4-214ENST00000568535 ARHGEF19Q8IW93 802 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 OR5B17Q8NGF7 314 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 HELQQ8TDG4 1101 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 PPP1R13LQ8WUF5 828 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 ZNF592Q92610 1267 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.85□□□□□ -0.99
BBS4-214ENST00000568535 CDHR5Q9HBB8 845 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 ADAMTS1Q9UHI8 967 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 ITGA11Q9UKX5 1188 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 CDY2AQ9Y6F7 541 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 SQORQ9Y6N5 450 aa8.85□□□□□ -0.99
BBS4-214ENST00000568535 SIP14410 1827 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 THSD7BQ9C0I4 1608 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 DNM1LO00429 736 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 LRRN2O75325 713 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 VNN1O95497 513 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 ASS1P00966 412 aaKnown RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 PLEKP08567 350 aaPredicted RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 KRT19P08727 400 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 KRT5P13647 590 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 CASQ1P31415 396 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 PDE6CP51160 858 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 NOP14P78316 857 aaKnown RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 RBP5P82980 135 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 CYP27A1Q02318 531 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 CUL2Q13617 745 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 NAB2Q15742 525 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 IFI16Q16666 785 aaKnown RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 SLC10A6Q3KNW5 377 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 TWF2Q6IBS0 349 aaKnown RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 PPP1R2P3Q6NXS1 205 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 ALKBH5Q6P6C2 394 aaKnown RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 ZNF571Q7Z3V5 609 aaPredicted RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 ZNF677Q86XU0 584 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 FAM71AQ8IYT1 594 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 TTC39CQ8N584 583 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 RNF10Q8N5U6 811 aaKnown RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 CEP120Q8N960 986 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 BEST2Q8NFU1 509 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 SHC3Q92529 594 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 TATDN2Q93075 761 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 AGPAT1Q99943 283 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 MTMR12Q9C0I1 747 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 GPR88Q9GZN0 384 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 SENP6Q9GZR1 1112 aaPredicted RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 DNAI2Q9GZS0 605 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 FAM124BQ9H5Z6 455 aaPredicted RBP8.84□□□□□ -0.99
BBS4-214ENST00000568535 SNTG2Q9NY99 539 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 INTUQ9ULD6 942 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 GUCA1BQ9UMX6 200 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 PHF24Q9UPV7 400 aa8.84□□□□□ -0.99
BBS4-214ENST00000568535 GRIN2DO15399 1336 aa8.83□□□□□ -1
BBS4-214ENST00000568535 ATP8B3O60423 1300 aa8.83□□□□□ -1
BBS4-214ENST00000568535 PTPRJQ12913 1337 aa8.83□□□□□ -1
BBS4-214ENST00000568535 A0A087X0T9 212 aa8.83□□□□□ -1
BBS4-214ENST00000568535 A0A1W2PQ45 241 aaPredicted RBP8.83□□□□□ -1
BBS4-214ENST00000568535 A0A1W2PQY0 241 aa8.83□□□□□ -1
BBS4-214ENST00000568535 ARVCFO00192 962 aa8.83□□□□□ -1
BBS4-214ENST00000568535 PJA2O43164 708 aa8.83□□□□□ -1
BBS4-214ENST00000568535 TACC1O75410 805 aa8.83□□□□□ -1
BBS4-214ENST00000568535 CST3P01034 146 aaPredicted RBP8.83□□□□□ -1
BBS4-214ENST00000568535 CD4P01730 458 aa8.83□□□□□ -1
BBS4-214ENST00000568535 CHRNA1P02708 482 aa8.83□□□□□ -1
BBS4-214ENST00000568535 CTSHP09668 335 aa8.83□□□□□ -1
BBS4-214ENST00000568535 H2AFZP0C0S5 128 aa8.83□□□□□ -1
BBS4-214ENST00000568535 FAM228BP0C875 321 aa8.83□□□□□ -1
BBS4-214ENST00000568535 SKIP12755 728 aa8.83□□□□□ -1
BBS4-214ENST00000568535 ATF7P17544 494 aaPredicted RBP8.83□□□□□ -1
BBS4-214ENST00000568535 VASPP50552 380 aaPredicted RBP8.83□□□□□ -1
BBS4-214ENST00000568535 WNT7BP56706 349 aa8.83□□□□□ -1
BBS4-214ENST00000568535 MYO1EQ12965 1108 aa8.83□□□□□ -1
BBS4-214ENST00000568535 NFX1Q12986 1120 aaKnown RBP8.83□□□□□ -1
BBS4-214ENST00000568535 PAK2Q13177 524 aa8.83□□□□□ -1
BBS4-214ENST00000568535 TUBB2AQ13885 445 aa8.83□□□□□ -1
BBS4-214ENST00000568535 ZNF699Q32M78 642 aa8.83□□□□□ -1
BBS4-214ENST00000568535 ZNF667Q5HYK9 610 aa8.83□□□□□ -1
BBS4-214ENST00000568535 FAM26DQ5JW98 314 aa8.83□□□□□ -1
BBS4-214ENST00000568535 JADE1Q6IE81 842 aa8.83□□□□□ -1
BBS4-214ENST00000568535 SYT10Q6XYQ8 523 aa8.83□□□□□ -1
BBS4-214ENST00000568535 H2AFVQ71UI9 128 aa8.83□□□□□ -1
BBS4-214ENST00000568535 FAM228AQ86W67 206 aa8.83□□□□□ -1
BBS4-214ENST00000568535 TRIM58Q8NG06 486 aa8.83□□□□□ -1
BBS4-214ENST00000568535 SH3TC2Q8TF17 1288 aa8.83□□□□□ -1
BBS4-214ENST00000568535 TMEM40Q8WWA1 233 aa8.83□□□□□ -1
BBS4-214ENST00000568535 SECISBP2LQ93073 1101 aaKnown RBP8.83□□□□□ -1
BBS4-214ENST00000568535 KIF12Q96FN5 646 aa8.83□□□□□ -1
BBS4-214ENST00000568535 CALR3Q96L12 384 aaKnown RBP8.83□□□□□ -1
BBS4-214ENST00000568535 KREMEN1Q96MU8 473 aa8.83□□□□□ -1
BBS4-214ENST00000568535 ALS2CR12Q96Q35 445 aa8.83□□□□□ -1
BBS4-214ENST00000568535 PI4K2AQ9BTU6 479 aa8.83□□□□□ -1
BBS4-214ENST00000568535 TUBB2BQ9BVA1 445 aa8.83□□□□□ -1
BBS4-214ENST00000568535 NIF3L1Q9GZT8 377 aa8.83□□□□□ -1
BBS4-214ENST00000568535 PDCL3Q9H2J4 239 aa8.83□□□□□ -1
BBS4-214ENST00000568535 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.83□□□□□ -1
BBS4-214ENST00000568535 SEPT11Q9NVA2 429 aaKnown RBP8.83□□□□□ -1
BBS4-214ENST00000568535 DPP3Q9NY33 737 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms