RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 LGALS16A8MUM7 142 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 WDR64B1ANS9 1081 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 PDHXO00330 501 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 N4BP3O15049 544 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 TGFB1I1O43294 461 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 USO1O60763 962 aaKnown RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 HIP1RO75146 1068 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 LYPLA2O95372 231 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 SKILP12757 684 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 MUTP22033 750 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 UBA1P22314 1058 aaKnown RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 GUCY2CP25092 1073 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 EEF1GP26641 437 aaKnown RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 YWHABP31946 246 aaKnown RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 PPP1R2P41236 205 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 CASP4P49662 377 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 JAK3P52333 1124 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 ZNF131P52739 623 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 GSDMDP57764 484 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 ACTR2P61160 394 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 LRRC63Q05C16 580 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 SPAG1Q07617 926 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 MTF1Q14872 753 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 NOLC1Q14978 699 aaKnown RBP eCLIP6.3□□□□□ -1.42e-12■□□□□ 10
SF3B3-210ENST00000567654 STXBP2Q15833 593 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 BMT2Q1RMZ1 405 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 ZNF394Q53GI3 561 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 PPM1JQ5JR12 505 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 UTP14CQ5TAP6 766 aaKnown RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 E4F1Q66K89 784 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 SPECC1LQ69YQ0 1117 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 ZNF746Q6NUN9 644 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 XRRA1Q6P2D8 792 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 LRFN4Q6PJG9 635 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 ABHD15Q6UXT9 468 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 ANO5Q75V66 913 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 FASTKD5Q7L8L6 764 aaKnown RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 ERMP1Q7Z2K6 904 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 C4orf19Q8IY42 314 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 DNERQ8NFT8 737 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 NOC3LQ8WTT2 800 aaKnown RBP6.3□□□□□ -1.4
SF3B3-210ENST00000567654 COPS5Q92905 334 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 MYRFLQ96LU7 910 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 IWS1Q96ST2 819 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 PCYT2Q99447 389 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 MMP19Q99542 508 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 SENP7Q9BQF6 1050 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 TUBGCP2Q9BSJ2 902 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 STRA6Q9BX79 667 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 TTYH3Q9C0H2 523 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 ZSWIM4Q9H7M6 989 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 CACNA2D2Q9NY47 1150 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 CRIM1Q9NZV1 1036 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 GABBR1Q9UBS5 961 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 FBXO40Q9UH90 709 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 RALGAPA2Q2PPJ7 1873 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 CASP8AP2Q9UKL3 1982 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ADGRA2Q96PE1 1338 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 A0A0U1RQJ8 604 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 HMX2A2RU54 273 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ARHGEF35A5YM69 484 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 TISP43B9A030 160 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 RBAK-RBAKDNI3L0D1 243 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 EPHB6O15197 1021 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 CLIC2O15247 247 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 EIF4EBP3O60516 100 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 MFAP3LO75121 409 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 TBCAO75347 108 aaKnown RBP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 EIF3JO75822 258 aaKnown RBP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 FARP2O94887 1054 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 GCNT3O95395 438 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 SLC25A27O95847 323 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 SUPT20HL2P0C7V6 817 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 GAP43P17677 238 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 SFPQP23246 707 aaKnown RBP eCLIP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 CASP14P31944 242 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ASPAP45381 313 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 MTIF2P46199 727 aaKnown RBP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 PSMC5P62195 406 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 PRKCEQ02156 737 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ID3Q02535 119 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 UBXN1Q04323 297 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 TTLL4Q14679 1199 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 LY6KQ17RY6 165 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 XKR9Q5GH70 373 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 NKAPLQ5M9Q1 402 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 HP1BP3Q5SSJ5 553 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 WDR78Q5VTH9 848 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 SWSAP1Q6NVH7 229 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 FOXR2Q6PJQ5 311 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 PRR23CQ6ZRP0 262 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 CYFIP1Q7L576 1253 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 HS2ST1Q7LGA3 356 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 UBE3DQ7Z6J8 389 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 ANKRD23Q86SG2 305 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 RASAL3Q86YV0 1011 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
SF3B3-210ENST00000567654 FBXO16Q8IX29 292 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-210ENST00000567654 FAM20CQ8IXL6 584 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms