RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 SPARCL1Q14515 664 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 TMED2Q15363 201 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 PDK4Q16654 411 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 AP1ARQ63HQ0 302 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 ACAD10Q6JQN1 1059 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 NSMFQ6X4W1 530 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 CEP128Q6ZU80 1094 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 MAEAQ7L5Y9 396 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 PARD3BQ8TEW8 1205 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 CYLDQ9NQC7 956 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 LNPEPQ9UIQ6 1025 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.67■□□□□ 0.26
COMMD4-215ENST00000566843 ASB3Q9Y575 518 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 ZNFX1Q9P2E3 1918 aaKnown RBP16.67■□□□□ 0.26
COMMD4-215ENST00000566843 MROH7Q68CQ1 1323 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 LRRD1A4D1F6 860 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 ECE2O60344 883 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 SNUPNO95149 360 aaKnown RBP16.67■□□□□ 0.26
COMMD4-215ENST00000566843 RRM1P23921 792 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 DAW1Q8N136 415 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 PLEKHO2Q8TD55 490 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 SMG5Q9UPR3 1016 aaKnown RBP16.67■□□□□ 0.26
COMMD4-215ENST00000566843 BCS1LQ9Y276 419 aa16.67■□□□□ 0.26
COMMD4-215ENST00000566843 HNRNPCL1O60812 293 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 MAPTP10636 758 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 CYP11B1P15538 503 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 PTPN4P29074 926 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 EPHB2P29323 1055 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 ADSSP30520 456 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 PTDSS1P48651 473 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 SNAP25P60880 206 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 RNASELQ05823 741 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 PTP4A2Q12974 167 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 TSNAXIP1Q2TAA8 658 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 APBB1IPQ7Z5R6 666 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 KIAA0825Q8IV33 1275 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 DNAJC9Q8WXX5 260 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 ZBTB10Q96DT7 871 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 C9orf72Q96LT7 481 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 TMEM117Q9H0C3 514 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 DENND2DQ9H6A0 471 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 TMEM206Q9H813 350 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 SAR1AQ9NR31 198 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 WRAP73Q9P2S5 460 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 R3HDM2Q9Y2K5 976 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 ATRNL1Q5VV63 1379 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 PECAM1P16284 738 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 MAGEA4P43358 317 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 MFAP3P55082 362 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 ADCY1Q08828 1119 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 KLF1Q13351 362 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 ALCAMQ13740 583 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 LLGL1Q15334 1064 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 CCNG2Q16589 344 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 USH1GQ495M9 461 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 SLC45A4Q5BKX6 768 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 THEMIS2Q5TEJ8 643 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 IZUMO3Q5VZ72 239 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 SLC30A9Q6PML9 568 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 HOMEZQ8IX15 550 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 ZCCHC9Q8N567 271 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 CCDC89Q8N998 374 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 RBBP8NLQ8NC74 664 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 TTC8Q8TAM2 541 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 DDX1Q92499 740 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 RPGRQ92834 1020 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 DDX27Q96GQ7 796 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 PAIP2Q9BPZ3 127 aaKnown RBP16.66■□□□□ 0.26
COMMD4-215ENST00000566843 DCLRE1BQ9H816 532 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 ACP6Q9NPH0 428 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 POLLQ9UGP5 575 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 LOXHD1Q8IVV2 1947 aa16.66■□□□□ 0.26
COMMD4-215ENST00000566843 A0A1W2PRG0 241 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 HOXA13P31271 388 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-215ENST00000566843 SLC1A1P43005 524 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 MXI1P50539 228 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 TUBP50607 506 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 GTF2IP78347 998 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 CCDC142Q17RM4 750 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 SLC30A10Q6XR72 485 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 ANKS1BQ7Z6G8 1248 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 PRUNE1Q86TP1 453 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 MFN1Q8IWA4 741 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 SUPT20HQ8NEM7 779 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 ZNF398Q8TD17 642 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 SPOCK2Q92563 424 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 FAM136AQ96C01 138 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 CFAP57Q96MR6 1250 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 TSC22D3Q99576 134 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 SYT15Q9BQS2 421 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 PCIF1Q9H4Z3 704 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 SLCO1B3Q9NPD5 702 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 AVENQ9NQS1 362 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-215ENST00000566843 SENP1Q9P0U3 644 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 GRID1Q9ULK0 1009 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 SPAG7O75391 227 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 CNGA1P29973 690 aa16.65■□□□□ 0.26
COMMD4-215ENST00000566843 MAPK4P31152 587 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms