RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 KRT10P13645 584 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 MARCKSL1P49006 195 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 CYP24A1Q07973 514 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 UGCGQ16739 394 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 P3H1Q32P28 736 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 CYP4A22Q5TCH4 519 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 ARMC9Q7Z3E5 817 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 RILPQ96NA2 401 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 PITPNM3Q9BZ71 974 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 SLIT2O94813 1529 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 F5H423 210 aaPredicted RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 MYBL1P10243 752 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 ITGA8P53708 1063 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 PDIA2Q13087 525 aaKnown RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 TRIM72Q6ZMU5 477 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 SIAH1Q8IUQ4 282 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 VPS52Q8N1B4 723 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 MCUR1Q96AQ8 359 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 GDF3Q9NR23 364 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 GRAP2O75791 330 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 ADRB2P07550 413 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 KRT3P12035 628 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 TCF7P36402 384 aaPredicted RBP12.29□□□□□ -0.44
CDH1-210ENST00000566612 CCNA1P78396 465 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 FAM102AQ5T9C2 384 aaPredicted RBP12.29□□□□□ -0.44
CDH1-210ENST00000566612 GPAT2Q6NUI2 795 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 CATSPER4Q7RTX7 472 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 CCNYQ8ND76 341 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 PRPF31Q8WWY3 499 aaKnown RBP12.29□□□□□ -0.44
CDH1-210ENST00000566612 RBM15Q96T37 977 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDH1-210ENST00000566612 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
CDH1-210ENST00000566612 SLC38A10Q9HBR0 1119 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 IGLV3-22A0A075B6J6 115 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 GZMAP12544 262 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 TTMPQ5BVD1 217 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 EPM2AIP1Q7L775 607 aaPredicted RBP12.29□□□□□ -0.44
CDH1-210ENST00000566612 PALB2Q86YC2 1186 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 C1orf131Q8NDD1 294 aaKnown RBP12.29□□□□□ -0.44
CDH1-210ENST00000566612 MIS12Q9H081 205 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 TCP11X1B4DZS4 312 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 I3L4J1 428 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 STK10O94804 968 aaKnown RBP12.29□□□□□ -0.44
CDH1-210ENST00000566612 GJB6O95452 261 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 MT-ND3P03897 115 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 SLC1A1P43005 524 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 EFNA5P52803 228 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 MARSP56192 900 aaKnown RBP12.29□□□□□ -0.44
CDH1-210ENST00000566612 CUL2Q13617 745 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 PPP1R2P3Q6NXS1 205 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 LENG9Q96B70 501 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 HVCN1Q96D96 273 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 CFAP36Q96G28 342 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 MMP19Q99542 508 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 SENP7Q9BQF6 1050 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 MTMR12Q9C0I1 747 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 TMBIM4Q9HC24 238 aa12.29□□□□□ -0.44
CDH1-210ENST00000566612 PLIN4Q96Q06 1357 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 MYH13Q9UKX3 1938 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
CDH1-210ENST00000566612 PTENP60484 403 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 IRX4P78413 519 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 SNCBQ16143 134 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 ZNF449Q6P9G9 518 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 EXOC8Q8IYI6 725 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 NOD1Q9Y239 953 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 SUPT20HL2P0C7V6 817 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 PHKA2P46019 1235 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 MYO1EQ12965 1108 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 GPR162Q16538 588 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 CFAP157Q5JU67 520 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 XRRA1Q6P2D8 792 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 KDM7AQ6ZMT4 941 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 MYCBPAPQ8TBZ2 947 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 CCHCR1Q8TD31 782 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 EPS8L1Q8TE68 723 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 XPO6Q96QU8 1125 aaKnown RBP12.28□□□□□ -0.44
CDH1-210ENST00000566612 RPS6KC1Q96S38 1066 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 C17orf75Q9HAS0 396 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 COL20A1Q9P218 1284 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 AKAP11Q9UKA4 1901 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 RGS7P49802 495 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 NLRP11P59045 1033 aaKnown RBP12.28□□□□□ -0.44
CDH1-210ENST00000566612 MYBPC2Q14324 1141 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 BMT2Q1RMZ1 405 aa12.28□□□□□ -0.44
CDH1-210ENST00000566612 CCDC60Q8IWA6 550 aaPredicted RBP12.28□□□□□ -0.44
CDH1-210ENST00000566612 GOLGA8RI6L899 631 aa12.27□□□□□ -0.44
CDH1-210ENST00000566612 ZBED1O96006 694 aa12.27□□□□□ -0.44
CDH1-210ENST00000566612 ITIH2P19823 946 aa12.27□□□□□ -0.44
CDH1-210ENST00000566612 SAT1P21673 171 aa12.27□□□□□ -0.44
CDH1-210ENST00000566612 HSPA9P38646 679 aaKnown RBP12.27□□□□□ -0.44
CDH1-210ENST00000566612 SNRPFP62306 86 aaKnown RBP12.27□□□□□ -0.44
CDH1-210ENST00000566612 ACTN3Q08043 901 aaPredicted RBP12.27□□□□□ -0.44
CDH1-210ENST00000566612 TMEM62Q0P6H9 643 aa12.27□□□□□ -0.44
CDH1-210ENST00000566612 TTLL4Q14679 1199 aa12.27□□□□□ -0.44
CDH1-210ENST00000566612 DAB2IPQ5VWQ8 1189 aa12.27□□□□□ -0.44
CDH1-210ENST00000566612 TRAIPQ9BWF2 469 aa12.27□□□□□ -0.44
CDH1-210ENST00000566612 ALG13Q9NP73 1137 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms