RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 CDH7Q9ULB5 785 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 VWA8A3KMH1 1905 aa16.58■□□□□ 0.24
CMTM3-212ENST00000566121 VPS13AQ96RL7 3174 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 CITO14578 2027 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 PODXLO00592 558 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 MEFVO15553 781 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-212ENST00000566121 ADAM12O43184 909 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 FAM189A1O60320 539 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 PDGFBP01127 241 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-212ENST00000566121 ATF2P15336 505 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 NPR3P17342 541 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 FSHRP23945 695 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 GBP2P32456 591 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-212ENST00000566121 AARSP49588 968 aaKnown RBP eCLIP16.57■□□□□ 0.24
CMTM3-212ENST00000566121 GTF2BQ00403 316 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 HTR4Q13639 388 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 GLRA4Q5JXX5 417 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 RSPO2Q6UXX9 243 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-212ENST00000566121 ALYREFQ86V81 257 aaKnown RBP16.57■□□□□ 0.24
CMTM3-212ENST00000566121 TCEAL8Q8IYN2 117 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 APPL2Q8NEU8 664 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 HASPINQ8TF76 798 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 ZBTB45Q96K62 511 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-212ENST00000566121 TBX20Q9UMR3 447 aa16.57■□□□□ 0.24
CMTM3-212ENST00000566121 SRPRBQ9Y5M8 271 aaKnown RBP16.57■□□□□ 0.24
CMTM3-212ENST00000566121 M0QZQ0 153 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 TKTP29401 623 aaKnown RBP16.56■□□□□ 0.24
CMTM3-212ENST00000566121 SF3A1Q15459 793 aaKnown RBP16.56■□□□□ 0.24
CMTM3-212ENST00000566121 VARS2Q5ST30 1063 aaKnown RBP16.56■□□□□ 0.24
CMTM3-212ENST00000566121 MTSS1LQ765P7 747 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 TMEM105Q8N8V8 129 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 RAD54LQ92698 747 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 FIZ1Q96SL8 496 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 REEP2Q9BRK0 252 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 GDE1Q9NZC3 331 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 CDY1Q9Y6F8 540 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 STYXL1Q9Y6J8 313 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 ZNF292O60281 2723 aa16.56■□□□□ 0.24
CMTM3-212ENST00000566121 FAM186AA6NE01 2351 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 A0A0B4J269 797 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 OGTO15294 1046 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 XPOTO43592 962 aaKnown RBP16.55■□□□□ 0.24
CMTM3-212ENST00000566121 TRAK2O60296 914 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 OAZ2O95190 189 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
CMTM3-212ENST00000566121 IGFBP6P24592 240 aaPredicted RBP16.55■□□□□ 0.24
CMTM3-212ENST00000566121 PTPAQ15257 358 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 ZRSR1Q15695 479 aaKnown RBP16.55■□□□□ 0.24
CMTM3-212ENST00000566121 GRASPQ7Z6J2 395 aaPredicted RBP16.55■□□□□ 0.24
CMTM3-212ENST00000566121 MAP4K3Q8IVH8 894 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 BEST2Q8NFU1 509 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 LRRC15Q8TF66 581 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 LARP4BQ92615 738 aaKnown RBP16.55■□□□□ 0.24
CMTM3-212ENST00000566121 SMOC2Q9H3U7 446 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 GOLGA2P5Q9HBQ8 144 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 STK17AQ9UEE5 414 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 UBQLN1Q9UMX0 589 aaKnown RBP16.55■□□□□ 0.24
CMTM3-212ENST00000566121 DERAQ9Y315 318 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 MYH11P35749 1972 aa16.55■□□□□ 0.24
CMTM3-212ENST00000566121 PLCG1P19174 1290 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 NBL1P41271 181 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 BRCC3P46736 316 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 OSTNP61366 133 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 ROR1Q01973 937 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 CWF19L1Q69YN2 538 aaKnown RBP16.54■□□□□ 0.24
CMTM3-212ENST00000566121 GPBP1Q86WP2 473 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 GLYCTKQ8IVS8 523 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 SLC7A14Q8TBB6 771 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 HVCN1Q96D96 273 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 STRA6Q9BX79 667 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 HAPLN2Q9GZV7 340 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 MFSD1Q9H3U5 465 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 SEL1LQ9UBV2 794 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 AFF4Q9UHB7 1163 aaKnown RBP16.54■□□□□ 0.24
CMTM3-212ENST00000566121 PCDHB8Q9UN66 801 aa16.54■□□□□ 0.24
CMTM3-212ENST00000566121 DOCK6Q96HP0 2047 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 GVINP1Q7Z2Y8 2422 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 RAD51AP2Q09MP3 1159 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 SLFN12LQ6IEE8 588 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 CCDC105Q8IYK2 499 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 MYCT1Q8N699 235 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 LEMD2Q8NC56 503 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 FGF13Q92913 245 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-212ENST00000566121 BORCS6Q96GS4 357 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 BACH2Q9BYV9 841 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 ZSCAN16Q9H4T2 348 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-212ENST00000566121 ASB7Q9H672 318 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 DNMT3BQ9UBC3 853 aaKnown RBP16.53■□□□□ 0.24
CMTM3-212ENST00000566121 HSFX1Q9UBD0 423 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 FBXL5Q9UKA1 691 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 CPSF3Q9UKF6 684 aaKnown RBP16.53■□□□□ 0.24
CMTM3-212ENST00000566121 NUB1Q9Y5A7 615 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 CFAP54Q96N23 3096 aa16.53■□□□□ 0.24
CMTM3-212ENST00000566121 NOTCH4Q99466 2003 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 NPHP3-ACAD11A0A0J9YXS1 232 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 WDR27A2RRH5 827 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 HNRNPDLO14979 420 aaKnown RBP16.52■□□□□ 0.24
CMTM3-212ENST00000566121 FAM13AO94988 1023 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 PTPN2P17706 415 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms