RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 E9PCH4 1651 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 ABCE1P61221 599 aaKnown RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 MED21Q13503 144 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 BAATQ14032 418 aaPredicted RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 RCOR2Q8IZ40 523 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 YIPF3Q9GZM5 350 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 ARHGEF38Q9NXL2 777 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 PDXKO00764 312 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 CHRNA5P30532 468 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 KDSRQ06136 332 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 ALX1Q15699 326 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 PCSK7Q16549 785 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 RARS2Q5T160 578 aaKnown RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 EPC1Q9H2F5 836 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 TRABDQ9H4I3 376 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 CLTCQ00610 1675 aaKnown RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 PMS1P54277 932 aaKnown RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 RAD23BP54727 409 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 ATP2C1P98194 919 aaPredicted RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 ARHGEF7Q14155 803 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 PTPRN2Q92932 1015 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 PHF21AQ96BD5 680 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 MTIF3Q9H2K0 278 aaKnown RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 XKR3Q5GH77 459 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 PAWRQ96IZ0 340 aaKnown RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 HPS4Q9NQG7 708 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 TRAF3IP3Q9Y228 551 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 FAM32AQ9Y421 112 aaKnown RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 PKP3Q9Y446 797 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 KIF28PB7ZC32 967 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 ENO1P06733 434 aaKnown RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 STAT4Q14765 748 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 P3H1Q32P28 736 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 DHX40Q8IX18 779 aaKnown RBP14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 MTA3Q9BTC8 594 aa14.3□□□□□ -0.12
CX3CL1-204ENST00000565912 TARSL2A2RTX5 802 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 HSPA1AP0DMV8 641 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 HSPA1BP0DMV9 641 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 ACTN3Q08043 901 aaPredicted RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 HIC1Q14526 733 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 USP10Q14694 798 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 TMCO5AQ8N6Q1 288 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 MED15Q96RN5 788 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 CAMSAP1Q5T5Y3 1602 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 SETD1BQ9UPS6 1966 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 EEF2KO00418 725 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 ORC4O43929 436 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 ZNF189O75820 626 aaPredicted RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 HSPA9P38646 679 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 TRADDQ15628 312 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 RABGAP1LQ5R372 815 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 NBPF10Q6P3W6 841 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 SHC4Q6S5L8 630 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 LBHD1Q9BQE6 289 aaPredicted RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 DGAT1O75907 488 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 INPP5AQ14642 412 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 SLC9A5Q14940 896 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 CYTH1Q15438 398 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 SRBD1Q8N5C6 995 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 SMARCAD1Q9H4L7 1026 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 RAB6BQ9NRW1 208 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 PSMD3O43242 534 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 PGM1P36871 562 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 MAGEA9P43362 315 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 NEK2P51955 445 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 EN1Q05925 392 aaPredicted RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 SLC25A41Q8N5S1 370 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 TMA16Q96EY4 203 aaKnown RBP14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 SENP7Q9BQF6 1050 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 OSBPL1AQ9BXW6 950 aa14.29□□□□□ -0.12
CX3CL1-204ENST00000565912 MYO1GB0I1T2 1018 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 AP3B1O00203 1094 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 GRAP2O75791 330 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 CYP2B6P20813 491 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 SOX11P35716 441 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 NCOA4Q13772 614 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 CCDC144BQ3MJ40 725 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 MMS22LQ6ZRQ5 1243 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 ZNF513Q8N8E2 541 aaPredicted RBP14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 SNX31Q8N9S9 440 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 MCEEQ96PE7 176 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 BCORL1Q5H9F3 1711 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 KIAA0391O15091 583 aaKnown RBP14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 KCNQ2O43526 872 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 GUCY1A2P33402 732 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 CDC42EP1Q00587 391 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 NFIXQ14938 502 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 STILQ15468 1287 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 MGAT5BQ3V5L5 792 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 TSPAN17Q96FV3 270 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 KATNAL1Q9BW62 490 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 ZC3H7BQ9UGR2 993 aaKnown RBP14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 GGT7Q9UJ14 662 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 SH3BP1Q9Y3L3 701 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 A0A1W2PQC6 194 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 KRT87PA6NCN2 255 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 SNX17Q15036 470 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 IER5Q5VY09 327 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms