RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TBX20Q9UMR3 447 aa7□□□□□ -1.29
TCF4-228ENST00000565393 DUSP12Q9UNI6 340 aa7□□□□□ -1.29
TCF4-228ENST00000565393 MRPS23Q9Y3D9 190 aaKnown RBP7□□□□□ -1.29
TCF4-228ENST00000565393 ZFP37Q9Y6Q3 630 aaPredicted RBP7□□□□□ -1.29
TCF4-228ENST00000565393 NUMBLQ9Y6R0 609 aa7□□□□□ -1.29
TCF4-228ENST00000565393 MYH9P35579 1960 aaKnown RBP7□□□□□ -1.29
TCF4-228ENST00000565393 EYSQ5T1H1 3165 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 LACTBL1A8MY62 500 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 ANHXE9PGG2 379 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 K7ENM7 598 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 SYN3O14994 580 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 SLC26A4O43511 780 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 TBCAO75347 108 aaKnown RBP6.99□□□□□ -1.29
TCF4-228ENST00000565393 SRFP11831 508 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 PLCG1P19174 1290 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 HOXA9P31269 272 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 GRIN1Q05586 938 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 PPP2R3AQ06190 1150 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 NOLC1Q14978 699 aaKnown RBP eCLIP6.99□□□□□ -1.29
TCF4-228ENST00000565393 KYAT1Q16773 422 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 TMEM119Q4V9L6 283 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 PABPC1LQ4VXU2 614 aaKnown RBP6.99□□□□□ -1.29
TCF4-228ENST00000565393 CYP4A22Q5TCH4 519 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 RRAGBQ5VZM2 374 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 IQCEQ6IPM2 695 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 RTL10Q7L3V2 364 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 DYMQ7RTS9 669 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 USP37Q86T82 979 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 ELMOD1Q8N336 334 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 DTWD2Q8NBA8 298 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 GPR152Q8TDT2 470 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 ING5Q8WYH8 240 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 RAD54LQ92698 747 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 DDX12PQ92771 950 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 FGF13Q92913 245 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 EPSTI1Q96J88 318 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 ZNF512Q96ME7 567 aaPredicted RBP6.99□□□□□ -1.29
TCF4-228ENST00000565393 CORO1BQ9BR76 489 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 REEP2Q9BRK0 252 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 PARVGQ9HBI0 331 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 SIT1Q9Y3P8 196 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 TIMM13Q9Y5L4 95 aaPredicted RBP6.99□□□□□ -1.29
TCF4-228ENST00000565393 CLIC4Q9Y696 253 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 LOXHD1Q8IVV2 1947 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 KIAA1671Q9BY89 1806 aa6.99□□□□□ -1.29
TCF4-228ENST00000565393 KRBA1A5PL33 1030 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 ABLIM1O14639 778 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 ZNF197O14709 1029 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 HNRNPDLO14979 420 aaKnown RBP6.98□□□□□ -1.29
TCF4-228ENST00000565393 OGTO15294 1046 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 XPOTO43592 962 aaKnown RBP6.98□□□□□ -1.29
TCF4-228ENST00000565393 GFRA3O60609 400 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 ABLIM3O94929 683 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 PAPLNO95428 1278 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 SEC24AO95486 1093 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 DCNP07585 359 aaKnown RBP6.98□□□□□ -1.29
TCF4-228ENST00000565393 RHOP08100 348 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 CXCL8P10145 99 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 CPB1P15086 417 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 ATF2P15336 505 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 AOC1P19801 751 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 NMT1P30419 496 aaKnown RBP6.98□□□□□ -1.29
TCF4-228ENST00000565393 ABCD1P33897 745 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 TXLNAP40222 546 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 TNFSF9P41273 254 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 NCKAP1LP55160 1127 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 ROR1Q01973 937 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 YWHAHQ04917 246 aaPredicted RBP6.98□□□□□ -1.29
TCF4-228ENST00000565393 ADCY1Q08828 1119 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 SNW1Q13573 536 aaKnown RBP6.98□□□□□ -1.29
TCF4-228ENST00000565393 HTR4Q13639 388 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 ZC2HC1CQ53FD0 456 aaPredicted RBP6.98□□□□□ -1.29
TCF4-228ENST00000565393 SLC44A4Q53GD3 710 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 ADALQ6DHV7 355 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 SLFN12LQ6IEE8 588 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 SLC8B1Q6J4K2 584 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 ARMCX5Q6P1M9 558 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 FAM173BQ6P4H8 233 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 MTSS1LQ765P7 747 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 SV2BQ7L1I2 683 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 BEST2Q8NFU1 509 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 KCNG4Q8TDN1 519 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 LARP4BQ92615 738 aaKnown RBP6.98□□□□□ -1.29
TCF4-228ENST00000565393 FGF14Q92915 247 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 SHDQ96IW2 340 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 SUSD3Q96L08 255 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 MSTO1Q9BUK6 570 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 HAPLN2Q9GZV7 340 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 TBC1D17Q9HA65 648 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 BLOC1S4Q9NUP1 217 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 TUBGCP4Q9UGJ1 667 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 FBXL5Q9UKA1 691 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 UBQLN1Q9UMX0 589 aaKnown RBP6.98□□□□□ -1.29
TCF4-228ENST00000565393 PCDHB8Q9UN66 801 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 CHD7Q9P2D1 2997 aa6.98□□□□□ -1.29
TCF4-228ENST00000565393 CUL9Q8IWT3 2517 aa6.97□□□□□ -1.29
TCF4-228ENST00000565393 A0A0B4J269 797 aa6.97□□□□□ -1.29
TCF4-228ENST00000565393 A0A0C4DFX4 3053 aa6.97□□□□□ -1.29
TCF4-228ENST00000565393 TTC26A0AVF1 554 aa6.97□□□□□ -1.29
TCF4-228ENST00000565393 WDR27A2RRH5 827 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms