RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 C21orf58P58505 322 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 TUBA1BP68363 451 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 ST5P78524 1137 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 AKAP17AQ02040 695 aaKnown RBP5.56□□□□□ -1.52
CAPN3-214ENST00000565274 DMPKQ09013 629 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 FZD5Q13467 585 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 RASGRF1Q13972 1273 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 NEDD9Q14511 834 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 SEMA3AQ14563 771 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 NR1I3Q14994 352 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 INAQ16352 499 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 LONRF2Q1L5Z9 754 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 CFAP100Q494V2 611 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 METTL11BQ5VVY1 283 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 SPECC1LQ69YQ0 1117 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 SPOCD1Q6ZMY3 1216 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 MFSD6Q6ZSS7 791 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 TUBA1AQ71U36 451 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 TAOK1Q7L7X3 1001 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 APTXQ7Z2E3 356 aaKnown RBP5.56□□□□□ -1.52
CAPN3-214ENST00000565274 ZER1Q7Z7L7 766 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 TEX11Q8IYF3 940 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 TAB3Q8N5C8 712 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-214ENST00000565274 TRIML2Q8N7C3 387 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 C1orf127Q8N9H9 656 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 C12orf50Q8NA57 414 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-214ENST00000565274 FANCBQ8NB91 859 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 CNNM3Q8NE01 707 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 CCDC148Q8NFR7 591 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 TRIM58Q8NG06 486 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 GIMAP7Q8NHV1 300 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 MIPOL1Q8TD10 442 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 ANKS1AQ92625 1134 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 CCDC51Q96ER9 411 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 COG8Q96MW5 612 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 SRPK1Q96SB4 655 aaKnown RBP5.56□□□□□ -1.52
CAPN3-214ENST00000565274 C7orf25Q9BPX7 421 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 CORO1BQ9BR76 489 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 UQCC2Q9BRT2 126 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 NTPCRQ9BSD7 190 aaKnown RBP5.56□□□□□ -1.52
CAPN3-214ENST00000565274 BRIP1Q9BX63 1249 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 OSBPL1AQ9BXW6 950 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 NAPBQ9H115 298 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 OSGEPQ9NPF4 335 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 INTS13Q9NVM9 706 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 TRMT112Q9UI30 125 aaKnown RBP5.56□□□□□ -1.52
CAPN3-214ENST00000565274 CROTQ9UKG9 612 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 RAB21Q9UL25 225 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 MTUS1Q9ULD2 1270 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 MRPL11Q9Y3B7 192 aaKnown RBP5.56□□□□□ -1.52
CAPN3-214ENST00000565274 ABCA3Q99758 1704 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 BCL9LQ86UU0 1499 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 MYH7P12883 1935 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 RREB1Q92766 1687 aa5.56□□□□□ -1.52
CAPN3-214ENST00000565274 DOCK2Q92608 1830 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 GAKO14976 1311 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 A6NHS1 94 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 ENO4A6NNW6 628 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 BTBD18B2RXH4 712 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 B4E1Z4 1266 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 TMEM232C9JQI7 657 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 H0YC42 278 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 H3BQF6 201 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 MYO1CO00159 1063 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 PDE2AO00408 941 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 BIN1O00499 593 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 XPOTO43592 962 aaKnown RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 OPA1O60313 960 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 IDH1O75874 414 aaKnown RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 GFPT2O94808 682 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 CNOT4O95628 575 aaKnown RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 BAG2O95816 211 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 OLFM2O95897 454 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 F13BP05160 661 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 TUBBP07437 444 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 CES1P23141 567 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 MARCKSP29966 332 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 ATP5DP30049 168 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 HOXA7P31268 230 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 HOXC12P31275 282 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 HOXD12P35452 270 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 GNL1P36915 607 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 PLCD1P51178 756 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 GTF2A2P52657 109 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 GNG11P61952 73 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 BNIP1Q12981 228 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 IKQ13123 557 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 PABPC4Q13310 644 aaKnown RBP eCLIP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 CUL4BQ13620 913 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 SSPNQ14714 243 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 SETMARQ53H47 684 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 CDKAL1Q5VV42 579 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 PI16Q6UXB8 463 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 SRGAP1Q7Z6B7 1085 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 TBC1D1Q86TI0 1168 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 IQCA1Q86XH1 822 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 DDX42Q86XP3 938 aaKnown RBP eCLIP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 DIS3L2Q8IYB7 885 aaKnown RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 TBC1D21Q8IYX1 336 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 SHISA5Q8N114 240 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms