RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 A0A1W2PQD8 194 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 UNCXA6NJT0 531 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 CYP26A1O43174 497 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 CST3P01034 146 aaPredicted RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 GLE1Q53GS7 698 aaKnown RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 RNF207Q6ZRF8 634 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 NLRP9Q7RTR0 991 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 ARL10Q8N8L6 244 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 CEP170P1Q96L14 293 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TRIM56Q9BRZ2 755 aaKnown RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 ZC4H2Q9NQZ6 224 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 MYH1P12882 1939 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 PAPPA2Q9BXP8 1791 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 RNF8O76064 485 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SGPL1O95470 568 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ATP6V1E1P36543 226 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 OXCT1P55809 520 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PPP3CAQ08209 521 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 CYP4A22Q5TCH4 519 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 CXorf38Q8TB03 319 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 LRRC8CQ8TDW0 803 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 CDHR5Q9HBB8 845 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 LIMA1Q9UHB6 759 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 COPG1Q9Y678 874 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 EPN1Q9Y6I3 576 aaPredicted RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 PHF20L1A8MW92 1017 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SOCS7O14512 581 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PALMO75781 387 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 RGS20O76081 388 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 NOL4O94818 638 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 FAM13AO94988 1023 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 CLCN3P51790 818 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 AFF1P51825 1210 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 SLC12A3P55017 1021 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PSMC5P62195 406 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ITIH3Q06033 890 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TRIM32Q13049 653 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PSMD2Q13200 908 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TBX2Q13207 712 aaPredicted RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 ANO5Q75V66 913 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ANKRD7Q92527 254 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ARHGEF26Q96DR7 871 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 MOCOSQ96EN8 888 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ARHGAP39Q9C0H5 1083 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 EURLQ9NYK6 297 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TRPC6Q9Y210 931 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PODXLO00592 558 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 MED7O43513 233 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ATP5HO75947 161 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 MMEP08473 750 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 YWHABP31946 246 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 PBX3P40426 434 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 NLRP11P59045 1033 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 MYL6P60660 151 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PDE1BQ01064 536 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 STILQ15468 1287 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 KDELC2Q7Z4H8 507 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ANKRD23Q86SG2 305 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 AMNQ9BXJ7 453 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 DDX47Q9H0S4 455 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 NMRK2Q9NPI5 230 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 DMGDHQ9UI17 866 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 ARHGAP6O43182 974 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 MTSS1O43312 755 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 EXOC3O60645 756 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 HOXB8P17481 243 aaPredicted RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 AARSP49588 968 aaKnown RBP eCLIP3.56□□□□□ -1.843e-6■■■■■ 61.8
CHD9-213ENST00000564845 TFDP1Q14186 410 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 CDO1Q16878 200 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 WDR44Q5JSH3 913 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 FAM26FQ5R3K3 315 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 MIER3Q7Z3K6 550 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TTC30AQ86WT1 665 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TTC30BQ8N4P2 665 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 FBF1Q8TES7 1133 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 RSRC1Q96IZ7 334 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 SERPINI1Q99574 410 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 RIC8AQ9NPQ8 531 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 C8orf4Q9NR00 106 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.56□□□□□ -1.84
CHD9-213ENST00000564845 PPP4CP60510 307 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PPP2R5CQ13362 524 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PHLDB3Q6NSJ2 640 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 RPAINQ86UA6 219 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 C3orf20Q8ND61 904 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TRIM51Q9BSJ1 452 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 EFHD1Q9BUP0 239 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TRIM15Q9C019 465 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 FAM49AQ9H0Q0 323 aaPredicted RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 RNPEPQ9H4A4 650 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ECT2Q9H8V3 914 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ORC6Q9Y5N6 252 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 A0A1B0GTH6 734 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 MEIS3P2A8K0S8 358 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PI4K2BG5E9Z4 385 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ZNF862O60290 1169 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 CTSHP09668 335 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SKIP12755 728 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 GARTP22102 1010 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ARMCX2Q7L311 632 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms