RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 MCM3P25205 808 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 KLRC1P26715 233 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 HOXC8P31273 242 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 GTF2H1P32780 548 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CLCN3P51790 818 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MFAP3P55082 362 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MCCD1P59942 119 aaPredicted RBP8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 DLG4P78352 724 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CYP24A1Q07973 514 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PPP3CAQ08209 521 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TMEM62Q0P6H9 643 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PPIGQ13427 754 aaKnown RBP eCLIP8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ARHGAP44Q17R89 818 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MARCH8Q5T0T0 291 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZNF618Q5T7W0 954 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CCDC181Q5TID7 509 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 KRT39Q6A163 491 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FAM109BQ6ICB4 259 aaPredicted RBP8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SLFN12LQ6IEE8 588 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MFSD5Q6N075 450 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SLC39A4Q6P5W5 647 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MTHFD1LQ6UB35 978 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 LRRC8DQ7L1W4 858 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RSPH3Q86UC2 560 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SERINC5Q86VE9 423 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CBWD2Q8IUF1 395 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 EXOC8Q8IYI6 725 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TDHQ8IZJ6 230 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 LRRC71Q8N4P6 559 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ASAP3Q8TDY4 903 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 DNAJB3Q8WWF6 145 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TAF4BQ92750 862 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 KCNN1Q92952 543 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FAM122AQ96E09 287 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FBXL18Q96ME1 805 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FAM161BQ96MY7 647 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 NT5C1BQ96P26 610 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PPP1R16BQ96T49 567 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TMEM117Q9H0C3 514 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 WNT8AQ9H1J5 351 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 DHX33Q9H6R0 707 aaKnown RBP8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SUGCTQ9HAC7 445 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TMEM8AQ9HCN3 771 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 OGFRQ9NZT2 677 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 NAGPAQ9UK23 515 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 NENFQ9UMX5 172 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 USP20Q9Y2K6 914 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PCDHGC5Q9Y5F6 944 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 NCANO14594 1321 aa8□□□□□ -1.13
MAP1LC3B-205ENST00000564638 A0A0A6YYK5 440 aaPredicted RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MBLAC1A4D2B0 266 aaPredicted RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZNF233A6NK53 670 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 LRRIQ3A6PVS8 624 aaPredicted RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZBTB42B2RXF5 422 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 M0QZ92 97 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PITPNM1O00562 1244 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 DDX3XO00571 662 aaKnown RBP eCLIP7.99□□□□□ -1.132e-11■■■■■ 32
MAP1LC3B-205ENST00000564638 ATP8B1O43520 1251 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 EXTL3O43909 919 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SRGAP2O75044 1071 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PALMO75781 387 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 C22orf31O95567 290 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RHOXF2BP0C7M4 288 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 IQCF3P0C7M6 154 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PNMA6AP0CW24 399 aaPredicted RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SELPP16109 830 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZSCAN20P17040 1043 aaPredicted RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 GLRA2P23416 452 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ADSSP30520 456 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ARL2P36404 184 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PAFAH1B1P43034 410 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ADAM17P78536 824 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ITIH3Q06033 890 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TARBP2Q15633 366 aaKnown RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TRIM71Q2Q1W2 868 aaKnown RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 C1orf220Q5T0J3 134 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 EFCAB12Q6NXP0 572 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CC2D1AQ6P1N0 951 aaPredicted RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TAF2Q6P1X5 1199 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 USP34Q70CQ2 3546 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ARHGEF19Q8IW93 802 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SYCE1Q8N0S2 351 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 LMO3Q8TAP4 145 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PLEKHO2Q8TD55 490 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PARD3BQ8TEW8 1205 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TCP11Q8WWU5 503 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TMEM143Q96AN5 459 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CCDC127Q96BQ5 260 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZNF668Q96K58 619 aaPredicted RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FAM81BQ96LP2 452 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MFSD14AQ96MC6 490 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SCLT1Q96NL6 688 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 OSBPL9Q96SU4 736 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MMS19Q96T76 1030 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RHOXF2Q9BQY4 288 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 JPH2Q9BR39 696 aaPredicted RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PACSIN1Q9BY11 444 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PARD6BQ9BYG5 372 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ANKZF1Q9H8Y5 726 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ARFGAP3Q9NP61 516 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms