RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 TSPAN18Q96SJ8 248 aa14.87□□□□□ -0.03
CNOT1-206ENST00000564557 C7orf25Q9BPX7 421 aa14.87□□□□□ -0.03
CNOT1-206ENST00000564557 HAPLN2Q9GZV7 340 aa14.87□□□□□ -0.03
CNOT1-206ENST00000564557 RXFP1Q9HBX9 757 aa14.87□□□□□ -0.03
CNOT1-206ENST00000564557 USP25Q9UHP3 1055 aa14.87□□□□□ -0.03
CNOT1-206ENST00000564557 UBQLN1Q9UMX0 589 aaKnown RBP14.87□□□□□ -0.03
CNOT1-206ENST00000564557 A0A1B0GVL5 298 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 LACTBL1A8MY62 500 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 TEX28O15482 410 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 PRPF6O94906 941 aaKnown RBP14.86□□□□□ -0.03
CNOT1-206ENST00000564557 LDHAP00338 332 aaKnown RBP14.86□□□□□ -0.03
CNOT1-206ENST00000564557 MYBP10242 640 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 ACOT2P49753 483 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 CLCN4P51793 760 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 SPAG1Q07617 926 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 PSMD5Q16401 504 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 ATAT1Q5SQI0 421 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 RARS2Q5T160 578 aaKnown RBP14.86□□□□□ -0.03
CNOT1-206ENST00000564557 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.86□□□□□ -0.03
CNOT1-206ENST00000564557 UNC13DQ70J99 1090 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 PALB2Q86YC2 1186 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 BEST2Q8NFU1 509 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 SLC22A17Q8WUG5 538 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 C18orf25Q96B23 403 aaPredicted RBP14.86□□□□□ -0.03
CNOT1-206ENST00000564557 CCDC34Q96HJ3 373 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 FBXL18Q96ME1 805 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 BLZF1Q9H2G9 400 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 FNIP2Q9P278 1114 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 SERTAD1Q9UHV2 236 aa14.86□□□□□ -0.03
CNOT1-206ENST00000564557 TTC26A0AVF1 554 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 PPP1R37O75864 691 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 EFEMP2O95967 443 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 SLFN14P0C7P3 912 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 PFKFB1P16118 471 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 CYP3A5P20815 502 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 MCM4P33991 863 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 MTHFRP42898 656 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 SYKP43405 635 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 SOX4Q06945 474 aaPredicted RBP14.85□□□□□ -0.03
CNOT1-206ENST00000564557 CBX2Q14781 532 aaPredicted RBP14.85□□□□□ -0.03
CNOT1-206ENST00000564557 ENOX2Q16206 610 aaKnown RBP14.85□□□□□ -0.03
CNOT1-206ENST00000564557 RTP2Q5QGT7 225 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 FAM26FQ5R3K3 315 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 SLC39A4Q6P5W5 647 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 SYCE2Q6PIF2 218 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 PRSS55Q6UWB4 352 aaPredicted RBP14.85□□□□□ -0.03
CNOT1-206ENST00000564557 PIK3R5Q8WYR1 880 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 CCDC47Q96A33 483 aaKnown RBP14.85□□□□□ -0.03
CNOT1-206ENST00000564557 CHAMP1Q96JM3 812 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 NECTIN4Q96NY8 510 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 PHF7Q9BWX1 381 aaPredicted RBP14.85□□□□□ -0.03
CNOT1-206ENST00000564557 ADAM7Q9H2U9 754 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 SFXN1Q9H9B4 322 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 CPSF3Q9UKF6 684 aaKnown RBP14.85□□□□□ -0.03
CNOT1-206ENST00000564557 STYXL1Q9Y6J8 313 aa14.85□□□□□ -0.03
CNOT1-206ENST00000564557 PVALEFA0A1B0GWK0 134 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 TISP43B9A030 160 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 RPL17P18621 184 aaKnown RBP14.84□□□□□ -0.03
CNOT1-206ENST00000564557 GARTP22102 1010 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 BRCC3P46736 316 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 CASP5P51878 434 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 ZP2Q05996 745 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 KCNA1Q09470 495 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 TMEM132DQ14C87 1099 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 ZBTB41Q5SVQ8 909 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 IER5LQ5T953 404 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 ARMCX5Q6P1M9 558 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 CNNM4Q6P4Q7 775 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 ANKS3Q6ZW76 656 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 C12orf76Q8N812 135 aaPredicted RBP14.84□□□□□ -0.03
CNOT1-206ENST00000564557 FSIP1Q8NA03 581 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 RPGRIP1Q96KN7 1286 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 STRA6Q9BX79 667 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 S1PR5Q9H228 398 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 PLEKHA4Q9H4M7 779 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 ASB7Q9H672 318 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 MAN1C1Q9NR34 630 aa14.84□□□□□ -0.03
CNOT1-206ENST00000564557 SPTBN5Q9NRC6 3674 aaKnown RBP14.84□□□□□ -0.03
CNOT1-206ENST00000564557 H7C4K7 107 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 I3L4J1 428 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 KIAA0391O15091 583 aaKnown RBP14.83□□□□□ -0.04
CNOT1-206ENST00000564557 EIF3DO15371 548 aaKnown RBP eCLIP14.83□□□□□ -0.04
CNOT1-206ENST00000564557 IL18RAPO95256 599 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 C1RP00736 705 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 SPATA31D3P0C874 917 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 FGFR3P22607 806 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 POU5F1Q01860 360 aaKnown RBP14.83□□□□□ -0.04
CNOT1-206ENST00000564557 CUL4BQ13620 913 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 LIN9Q5TKA1 542 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 JADE1Q6IE81 842 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 TMC5Q6UXY8 1006 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 SPATA31D4Q6ZUB0 917 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 APPL2Q8NEU8 664 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 LNX1Q8TBB1 728 aaPredicted RBP14.83□□□□□ -0.04
CNOT1-206ENST00000564557 HDAC7Q8WUI4 952 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 SUSD6Q92537 303 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 HPS3Q969F9 1004 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 PAGE5Q96GU1 130 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 FAM213AQ9BRX8 229 aa14.83□□□□□ -0.04
CNOT1-206ENST00000564557 PIDD1Q9HB75 910 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms