RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 MCCD1P59942 119 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-208ENST00000564247 CETN1Q12798 172 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 CACTINQ8WUQ7 758 aaKnown RBP18.34■□□□□ 0.53
CMTM3-208ENST00000564247 TSPAN18Q96SJ8 248 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 NXF3Q9H4D5 531 aaKnown RBP18.34■□□□□ 0.53
CMTM3-208ENST00000564247 PDE11AQ9HCR9 933 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 RTN4Q9NQC3 1192 aaKnown RBP18.34■□□□□ 0.53
CMTM3-208ENST00000564247 TMEM161AQ9NX61 479 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 HES2Q9Y543 173 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 KIAA1671Q9BY89 1806 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 CITO14578 2027 aa18.33■□□□□ 0.53
CMTM3-208ENST00000564247 A0A1B0GTH6 734 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 LACTBL1A8MY62 500 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 N4BP1O75113 896 aaKnown RBP18.33■□□□□ 0.52
CMTM3-208ENST00000564247 IBSPP21815 317 aaPredicted RBP18.33■□□□□ 0.52
CMTM3-208ENST00000564247 AKAP5P24588 427 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 BMPR1AP36894 532 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 UBXN1Q04323 297 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 GPM6BQ13491 265 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 NR1I3Q14994 352 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 DUOXA2Q1HG44 320 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 SLC10A6Q3KNW5 377 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 APTXQ7Z2E3 356 aaKnown RBP18.33■□□□□ 0.52
CMTM3-208ENST00000564247 ECHDC2Q86YB7 292 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 RNF169Q8NCN4 708 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 SLC35C1Q96A29 364 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 NAP1L5Q96NT1 182 aaPredicted RBP18.33■□□□□ 0.52
CMTM3-208ENST00000564247 XPO4Q9C0E2 1151 aaKnown RBP18.33■□□□□ 0.52
CMTM3-208ENST00000564247 GIT1Q9Y2X7 761 aa18.33■□□□□ 0.52
CMTM3-208ENST00000564247 TTC26A0AVF1 554 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 LRRIQ3A6PVS8 624 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-208ENST00000564247 LGALS16A8MUM7 142 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 RECQL4O94761 1208 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 TRIM49P0CI25 452 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 TRIM49CP0CI26 452 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 CTNNB1P35222 781 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 GATMP50440 423 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 DLG4P78352 724 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 NT5DC4Q86YG4 428 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 WDR49Q8IV35 697 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 MRPL38Q96DV4 380 aaKnown RBP18.32■□□□□ 0.52
CMTM3-208ENST00000564247 POP1Q99575 1024 aaKnown RBP18.32■□□□□ 0.52
CMTM3-208ENST00000564247 CGRRF1Q99675 332 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 PLVAPQ9BX97 442 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 RNF39Q9H2S5 420 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 MMRN2Q9H8L6 949 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 PRDM6Q9NQX0 595 aa18.32■□□□□ 0.52
CMTM3-208ENST00000564247 MRPL42Q9Y6G3 142 aaKnown RBP18.32■□□□□ 0.52
CMTM3-208ENST00000564247 SPTBN5Q9NRC6 3674 aaKnown RBP18.32■□□□□ 0.52
CMTM3-208ENST00000564247 P4HA2O15460 535 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 ADCY5O95622 1261 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 TNNC2P02585 160 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 FMO5P49326 533 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 ZNF75DP51815 510 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 CLDN10P78369 228 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 PTPROQ16827 1216 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 PAN2Q504Q3 1202 aaKnown RBP18.31■□□□□ 0.52
CMTM3-208ENST00000564247 MIIPQ5JXC2 388 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 PLEKHO2Q8TD55 490 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 ATXN2LQ8WWM7 1075 aaKnown RBP18.31■□□□□ 0.52
CMTM3-208ENST00000564247 ANKRD36BP1Q96IX9 119 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 SNX27Q96L92 541 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 C11orf84Q9BUA3 381 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-208ENST00000564247 TMEM8AQ9HCN3 771 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 THEGQ9P2T0 379 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 DERAQ9Y315 318 aa18.31■□□□□ 0.52
CMTM3-208ENST00000564247 R3HCC1Q9Y3T6 440 aaKnown RBP18.31■□□□□ 0.52
CMTM3-208ENST00000564247 AP5Z1O43299 807 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 HOXA2O43364 376 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 XPOTO43592 962 aaKnown RBP18.3■□□□□ 0.52
CMTM3-208ENST00000564247 TMEM191BP0C7N4 346 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 GCLMP48507 274 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 MXI1P50539 228 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 TFAMQ00059 246 aaKnown RBP18.3■□□□□ 0.52
CMTM3-208ENST00000564247 KRT39Q6A163 491 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 ALKAL1Q6UXT8 129 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 GBP6Q6ZN66 633 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 KIF12Q96FN5 646 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 MRFAP1L1Q96HT8 127 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 PCMTD1Q96MG8 357 aaPredicted RBP18.3■□□□□ 0.52
CMTM3-208ENST00000564247 RPS6KC1Q96S38 1066 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 RSAD1Q9HA92 442 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 INTS13Q9NVM9 706 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 KLK14Q9P0G3 267 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 C2CD2Q9Y426 696 aa18.3■□□□□ 0.52
CMTM3-208ENST00000564247 TEX33O43247 280 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 PHACTR2O75167 634 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 MYL7Q01449 175 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 PPP3CAQ08209 521 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 BIRC3Q13489 604 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 TMEM132DQ14C87 1099 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 SKIV2LQ15477 1246 aaKnown RBP18.29■□□□□ 0.52
CMTM3-208ENST00000564247 C1orf220Q5T0J3 134 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 JADE1Q6IE81 842 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 ZNF598Q86UK7 904 aaKnown RBP18.29■□□□□ 0.52
CMTM3-208ENST00000564247 DRC7Q8IY82 874 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 LPPQ93052 612 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 LMAN2LQ9H0V9 348 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 CNTN3Q9P232 1028 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms