RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 ZNF461Q8TAF7 563 aa27.46■■□□□ 1.99
SPG7-208ENST00000563783 LRRC15Q8TF66 581 aa27.46■■□□□ 1.99
SPG7-208ENST00000563783 BICD1Q96G01 975 aa27.46■■□□□ 1.99
SPG7-208ENST00000563783 SUSD3Q96L08 255 aa27.46■■□□□ 1.99
SPG7-208ENST00000563783 SMOC2Q9H3U7 446 aa27.46■■□□□ 1.99
SPG7-208ENST00000563783 ST6GALNAC4Q9H4F1 302 aa27.46■■□□□ 1.99
SPG7-208ENST00000563783 KCNH3Q9ULD8 1083 aa27.46■■□□□ 1.99
SPG7-208ENST00000563783 TBX20Q9UMR3 447 aa27.46■■□□□ 1.99
SPG7-208ENST00000563783 NPHP3-ACAD11A0A0J9YXS1 232 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 HNRNPDLO14979 420 aaKnown RBP27.45■■□□□ 1.98
SPG7-208ENST00000563783 TRAK2O60296 914 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 TBC1D4O60343 1298 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 FSHRP23945 695 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 IGFBP6P24592 240 aaPredicted RBP27.45■■□□□ 1.98
SPG7-208ENST00000563783 DDIT3P35638 169 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 BRCC3P46736 316 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 MRPL58Q14197 206 aaKnown RBP27.45■■□□□ 1.98
SPG7-208ENST00000563783 KARSQ15046 597 aaKnown RBP27.45■■□□□ 1.98
SPG7-208ENST00000563783 VARS2Q5ST30 1063 aaKnown RBP27.45■■□□□ 1.98
SPG7-208ENST00000563783 MYCT1Q8N699 235 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 SLC7A14Q8TBB6 771 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 BACH2Q9BYV9 841 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 MFSD1Q9H3U5 465 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 AVENQ9NQS1 362 aaPredicted RBP27.45■■□□□ 1.98
SPG7-208ENST00000563783 NUB1Q9Y5A7 615 aa27.45■■□□□ 1.98
SPG7-208ENST00000563783 MYH15Q9Y2K3 1946 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 XPOTO43592 962 aaKnown RBP27.44■■□□□ 1.98
SPG7-208ENST00000563783 GALR2O43603 387 aaPredicted RBP27.44■■□□□ 1.98
SPG7-208ENST00000563783 TBCAO75347 108 aaKnown RBP27.44■■□□□ 1.98
SPG7-208ENST00000563783 ABLIM3O94929 683 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 MYBP10242 640 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 SRFP11831 508 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 HARSP12081 509 aaKnown RBP27.44■■□□□ 1.98
SPG7-208ENST00000563783 SYT1P21579 422 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 PAX3P23760 479 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 LRPAP1P30533 357 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 LIG4P49917 911 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 GTF2BQ00403 316 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 GRIN1Q05586 938 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 HTR4Q13639 388 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 ZBTB6Q15916 424 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 CD302Q8IX05 232 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 SLC44A3Q8N4M1 653 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 APPL2Q8NEU8 664 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 OXCT2Q9BYC2 517 aaPredicted RBP27.44■■□□□ 1.98
SPG7-208ENST00000563783 CDH7Q9ULB5 785 aa27.44■■□□□ 1.98
SPG7-208ENST00000563783 SRPRBQ9Y5M8 271 aaKnown RBP27.44■■□□□ 1.98
SPG7-208ENST00000563783 ANK1P16157 1881 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 ARHGEF37A1IGU5 675 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 K7ENM7 598 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 OGTO15294 1046 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 FAM189A1O60320 539 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 POU5F1Q01860 360 aaKnown RBP27.43■■□□□ 1.98
SPG7-208ENST00000563783 CACNB1Q02641 598 aaPredicted RBP27.43■■□□□ 1.98
SPG7-208ENST00000563783 RESTQ13127 1097 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 MCM6Q14566 821 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 TPGS2Q68CL5 300 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 RSPO2Q6UXX9 243 aaPredicted RBP27.43■■□□□ 1.98
SPG7-208ENST00000563783 GET4Q7L5D6 327 aaPredicted RBP27.43■■□□□ 1.98
SPG7-208ENST00000563783 GRASPQ7Z6J2 395 aaPredicted RBP27.43■■□□□ 1.98
SPG7-208ENST00000563783 MAP4K3Q8IVH8 894 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 C18orf25Q96B23 403 aaPredicted RBP27.43■■□□□ 1.98
SPG7-208ENST00000563783 FIZ1Q96SL8 496 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 HAPLN2Q9GZV7 340 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 CCDC39Q9UFE4 941 aa27.43■■□□□ 1.98
SPG7-208ENST00000563783 UBQLN1Q9UMX0 589 aaKnown RBP27.43■■□□□ 1.98
SPG7-208ENST00000563783 A0A0B4J269 797 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 I3L4J1 428 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 KRT18P05783 430 aaKnown RBP27.42■■□□□ 1.98
SPG7-208ENST00000563783 CXCL8P10145 99 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 MATR3P43243 847 aaKnown RBP eCLIP27.42■■□□□ 1.98
SPG7-208ENST00000563783 MRE11P49959 708 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 ROR1Q01973 937 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 PPP2R3AQ06190 1150 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 TCEAL8Q8IYN2 117 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 HVCN1Q96D96 273 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 RTP3Q9BQQ7 232 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 SLC2A4RGQ9NR83 387 aa27.42■■□□□ 1.98
SPG7-208ENST00000563783 FBXO2Q9UK22 296 aaPredicted RBP27.42■■□□□ 1.98
SPG7-208ENST00000563783 ATF2P15336 505 aa27.41■■□□□ 1.98
SPG7-208ENST00000563783 TXLNAP40222 546 aa27.41■■□□□ 1.98
SPG7-208ENST00000563783 AARSP49588 968 aaKnown RBP eCLIP27.41■■□□□ 1.98
SPG7-208ENST00000563783 ZNF280DQ6N043 979 aa27.41■■□□□ 1.98
SPG7-208ENST00000563783 MTSS1LQ765P7 747 aa27.41■■□□□ 1.98
SPG7-208ENST00000563783 TMEM105Q8N8V8 129 aa27.41■■□□□ 1.98
SPG7-208ENST00000563783 KRI1Q8N9T8 703 aaKnown RBP27.41■■□□□ 1.98
SPG7-208ENST00000563783 ZSCAN16Q9H4T2 348 aaPredicted RBP27.41■■□□□ 1.98
SPG7-208ENST00000563783 SEL1LQ9UBV2 794 aa27.41■■□□□ 1.98
SPG7-208ENST00000563783 FBXL21Q9UKT6 434 aa27.41■■□□□ 1.98
SPG7-208ENST00000563783 PCDHB8Q9UN66 801 aa27.41■■□□□ 1.98
SPG7-208ENST00000563783 CLIC4Q9Y696 253 aa27.41■■□□□ 1.98
SPG7-208ENST00000563783 M0QZQ0 153 aa27.4■■□□□ 1.98
SPG7-208ENST00000563783 CCL16O15467 120 aa27.4■■□□□ 1.98
SPG7-208ENST00000563783 AOC1P19801 751 aa27.4■■□□□ 1.98
SPG7-208ENST00000563783 MCM4P33991 863 aa27.4■■□□□ 1.98
SPG7-208ENST00000563783 DHX8Q14562 1220 aaKnown RBP27.4■■□□□ 1.98
SPG7-208ENST00000563783 ALYREFQ86V81 257 aaKnown RBP27.4■■□□□ 1.98
SPG7-208ENST00000563783 PABPC1LQ4VXU2 614 aaKnown RBP27.39■■□□□ 1.98
SPG7-208ENST00000563783 CWF19L1Q69YN2 538 aaKnown RBP27.39■■□□□ 1.98
SPG7-208ENST00000563783 SLFN12LQ6IEE8 588 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms