RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 MCM8Q9UJA3 840 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 INTUQ9ULD6 942 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 MAST3O60307 1309 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 SALL3Q9BXA9 1300 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 KIAA0391O15091 583 aaKnown RBP4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 CKBP12277 381 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 ALAS1P13196 640 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 SLFN5Q08AF3 891 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 INAVAQ3KP66 663 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 PRR16Q569H4 304 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 ADGRG3Q86Y34 549 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 RHOT1Q8IXI2 618 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 DCBLD1Q8N8Z6 715 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 NTN5Q8WTR8 489 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 FUBP1Q96AE4 644 aaKnown RBP4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 MARS2Q96GW9 593 aaKnown RBP4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 ZNF764Q96H86 408 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 BOD1Q96IK1 185 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 C7orf25Q9BPX7 421 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 R3HDMLQ9H3Y0 253 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 GSTO2Q9H4Y5 243 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 GALNT9Q9HCQ5 603 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 TMEM74BQ9NUR3 256 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 HSFX1Q9UBD0 423 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 TUBD1Q9UJT1 453 aa4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 MTO1Q9Y2Z2 717 aaKnown RBP4.53□□□□□ -1.68
HMGB1P33-201ENST00000563485 ZFPL1O95159 310 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 MT-CO1P00395 513 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 CXCR5P32302 372 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 PTH2RP49190 550 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 TARDBPQ13148 414 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 CYP2A13Q16696 494 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 PGM2L1Q6PCE3 622 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 FOXR2Q6PJQ5 311 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 FAM43AQ8N2R8 423 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 FITM2Q8N6M3 262 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 JADE3Q92613 823 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 PUS7LQ9H0K6 701 aaKnown RBP4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 C11orf54Q9H0W9 315 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 PTGFRNQ9P2B2 879 aa4.52□□□□□ -1.69
HMGB1P33-201ENST00000563485 NDUFS2O75306 463 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 C5AR1P21730 350 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 FBLP22087 321 aaKnown RBP4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 SLC6A4P31645 630 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 WASP42768 502 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 CTXN1P60606 82 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 CREMQ03060 361 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 ACAP2Q15057 778 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 GEN1Q17RS7 908 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 ABCB5Q2M3G0 1257 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 ERCC6LQ2NKX8 1250 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 DACT2Q5SW24 774 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 Q6ZNX1 250 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 NECAB2Q7Z6G3 386 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 SIMC1Q8NDZ2 872 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 C1orf162Q8NEQ5 155 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 TBC1D15Q8TC07 691 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 NUP133Q8WUM0 1156 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 SSH1Q8WYL5 1049 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 TMX3Q96JJ7 454 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 PNKPQ96T60 521 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 TMX1Q9H3N1 280 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 UNKLQ9H9P5 680 aaKnown RBP4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 SPC25Q9HBM1 224 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 ALG13Q9NP73 1137 aaKnown RBP4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 CASS4Q9NQ75 786 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 TBCCD1Q9NVR7 557 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 MKS1Q9NXB0 559 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 ATP8A1Q9Y2Q0 1164 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 INSL6Q9Y581 213 aa4.51□□□□□ -1.69
HMGB1P33-201ENST00000563485 COL11A2P13942 1736 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 MGST3O14880 152 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 PCDHGA12O60330 932 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 ERN1O75460 977 aaKnown RBP4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 SBK3P0C264 359 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 FCER1AP12319 257 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 VAV2P52735 878 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 CCDC142Q17RM4 750 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 FBXO42Q6P3S6 717 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 MIGA2Q7L4E1 593 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 RD3Q7Z3Z2 195 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 RSPH3Q86UC2 560 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 SLC9A6Q92581 669 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 VOPP1Q96AW1 172 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 SAP30BPQ9UHR5 308 aaKnown RBP4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 TRHDEQ9UKU6 1024 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 PCDHGA9Q9Y5G4 932 aaKnown RBP4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 PCDHGA8Q9Y5G5 932 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 PCDHGA7Q9Y5G6 932 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 PCDHGA6Q9Y5G7 932 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 PCDHGA3Q9Y5H0 932 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 PCDHA13Q9Y5I0 950 aa4.5□□□□□ -1.69
HMGB1P33-201ENST00000563485 SPATA31A6Q5VVP1 1343 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 MYADML2A6NDP7 307 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 MASP2O00187 686 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 GRM6O15303 877 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 HAUS5O94927 633 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 CDC42EP1Q00587 391 aa4.49□□□□□ -1.69
HMGB1P33-201ENST00000563485 ZNF169Q14929 603 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms