RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 C2CD2Q9Y426 696 aa15.38■□□□□ 0.05
CNN2-204ENST00000562075 HES2Q9Y543 173 aa15.38■□□□□ 0.05
CNN2-204ENST00000562075 ASS1P00966 412 aaKnown RBP15.37■□□□□ 0.05
CNN2-204ENST00000562075 KRT19P08727 400 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 CKBP12277 381 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 ZSCAN20P17040 1043 aaPredicted RBP15.37■□□□□ 0.05
CNN2-204ENST00000562075 TBXAS1P24557 533 aaPredicted RBP15.37■□□□□ 0.05
CNN2-204ENST00000562075 ANXA13P27216 316 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 CD52P31358 61 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 CDK7P50613 346 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 MYL6P60660 151 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 PTK2Q05397 1052 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 LPIN1Q14693 890 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 SGSM1Q2NKQ1 1148 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 ZNF699Q32M78 642 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 KIAA1328Q86T90 577 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 VPS36Q86VN1 386 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 HACE1Q8IYU2 909 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 C1orf127Q8N9H9 656 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 SHC3Q92529 594 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.37■□□□□ 0.052e-13■■■■■ 50.4
CNN2-204ENST00000562075 AGO3Q9H9G7 860 aaKnown RBP15.37■□□□□ 0.05
CNN2-204ENST00000562075 APOBEC3GQ9HC16 384 aaKnown RBP15.37■□□□□ 0.05
CNN2-204ENST00000562075 PADI3Q9ULW8 664 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 REXO2Q9Y3B8 237 aaKnown RBP15.37■□□□□ 0.05
CNN2-204ENST00000562075 R3HCC1Q9Y3T6 440 aaKnown RBP15.37■□□□□ 0.05
CNN2-204ENST00000562075 IPPQ9Y573 584 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 SQORQ9Y6N5 450 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 CITO14578 2027 aa15.37■□□□□ 0.05
CNN2-204ENST00000562075 CST3P01034 146 aaPredicted RBP15.36■□□□□ 0.05
CNN2-204ENST00000562075 TFRCP02786 760 aaKnown RBP15.36■□□□□ 0.05
CNN2-204ENST00000562075 KRT5P13647 590 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 AKAP5P24588 427 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 CUL2Q13617 745 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 PTPN14Q15678 1187 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 PKN2Q16513 984 aaKnown RBP15.36■□□□□ 0.05
CNN2-204ENST00000562075 ASTE1Q2TB18 679 aaPredicted RBP15.36■□□□□ 0.05
CNN2-204ENST00000562075 DNTTIP2Q5QJE6 756 aaKnown RBP15.36■□□□□ 0.05
CNN2-204ENST00000562075 ZNF571Q7Z3V5 609 aaPredicted RBP15.36■□□□□ 0.05
CNN2-204ENST00000562075 FAM71AQ8IYT1 594 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 USP38Q8NB14 1042 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 SMG8Q8ND04 991 aaKnown RBP15.36■□□□□ 0.05
CNN2-204ENST00000562075 CAGE1Q8TC20 777 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 TAF4BQ92750 862 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 ZNF333Q96JL9 665 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 DPP3Q9NY33 737 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 CNTN3Q9P232 1028 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 ITGA11Q9UKX5 1188 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 NUB1Q9Y5A7 615 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 PCDHB2Q9Y5E7 798 aa15.36■□□□□ 0.05
CNN2-204ENST00000562075 TLR3O15455 904 aaKnown RBP15.35■□□□□ 0.05
CNN2-204ENST00000562075 LCA5LO95447 670 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 ITGB3P05106 788 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 CTCFP49711 727 aaPredicted RBP15.35■□□□□ 0.05
CNN2-204ENST00000562075 LBX1P52954 281 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 CYP27A1Q02318 531 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 GFPT1Q06210 699 aaPredicted RBP15.35■□□□□ 0.05
CNN2-204ENST00000562075 SLC18A3Q16572 532 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 ARHGAP29Q52LW3 1261 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 SCARA3Q6AZY7 606 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 FAM126BQ8IXS8 530 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 BEST2Q8NFU1 509 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 U2AF1L4Q8WU68 220 aaKnown RBP15.35■□□□□ 0.05
CNN2-204ENST00000562075 JAKMIP2Q96AA8 810 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 ARID3AQ99856 593 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 IFIH1Q9BYX4 1025 aaKnown RBP15.35■□□□□ 0.05
CNN2-204ENST00000562075 NIF3L1Q9GZT8 377 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 CRISPLD2Q9H0B8 497 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 LUC7LQ9NQ29 371 aaKnown RBP15.35■□□□□ 0.05
CNN2-204ENST00000562075 LZTFL1Q9NQ48 299 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 FAM105AQ9NUU6 356 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 KLK14Q9P0G3 267 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 SIX4Q9UIU6 781 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 HTTP42858 3142 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 UMODL1Q5DID0 1318 aa15.35■□□□□ 0.05
CNN2-204ENST00000562075 RBAK-RBAKDNI3L0D1 243 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 KIF2AO00139 706 aaPredicted RBP15.34■□□□□ 0.05
CNN2-204ENST00000562075 ZNF263O14978 683 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 CYP26A1O43174 497 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 SGPL1O95470 568 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 ITGA4P13612 1032 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 TNNT1P13805 278 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 POLR2BP30876 1174 aaKnown RBP15.34■□□□□ 0.05
CNN2-204ENST00000562075 ATICP31939 592 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 RAB27AP51159 221 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 GUCY2FP51841 1108 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 VAV2P52735 878 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 RBP5P82980 135 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 BFSP2Q13515 415 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 GLRA4Q5JXX5 417 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 TRAF7Q6Q0C0 670 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 ALKAL1Q6UXT8 129 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 NYAP1Q6ZVC0 841 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 TXLNBQ8N3L3 684 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 ARMC5Q96C12 935 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 TSPAN18Q96SJ8 248 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 OSBPL7Q9BZF2 842 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 XYLT2Q9H1B5 865 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
CNN2-204ENST00000562075 ADAMTS1Q9UHI8 967 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms