RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TULP1O00294 542 aaPredicted RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 STAU1O95793 577 aaKnown RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 ASS1P00966 412 aaKnown RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 GHRP10912 638 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 COL6A1P12109 1028 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 CYP3A5P20815 502 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 CD52P31358 61 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 ATICP31939 592 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 SOX5P35711 763 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 MNX1P50219 401 aaPredicted RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 APBA1Q02410 837 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 NCOA4Q13772 614 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 DSC3Q14574 896 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 DRAP1Q14919 205 aaPredicted RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 ASIC2Q16515 512 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 XKR4Q5GH76 650 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 JADE1Q6IE81 842 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 TRAF7Q6Q0C0 670 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 IRF2BP2Q7Z5L9 587 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 MRPL10Q7Z7H8 261 aaKnown RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 EFCAB13Q8IY85 973 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 PPM1KQ8N3J5 372 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 SMG8Q8ND04 991 aaKnown RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 SNX27Q96L92 541 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 CCDC42Q96M95 316 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 CHP1Q99653 195 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 TMEM106CQ9BVX2 250 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 MTMR12Q9C0I1 747 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 NXF3Q9H4D5 531 aaKnown RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 AGO3Q9H9G7 860 aaKnown RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 NHEJ1Q9H9Q4 299 aaPredicted RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 UBN1Q9NPG3 1134 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 FAM105AQ9NUU6 356 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 PYCARDQ9ULZ3 195 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 R3HCC1Q9Y3T6 440 aaKnown RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 IPPQ9Y573 584 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 PCDHB2Q9Y5E7 798 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 EPN1Q9Y6I3 576 aaPredicted RBP9.27□□□□□ -0.93
TRAF3-209ENST00000560463 A0A0U1RQF3 1178 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 SOWAHDA6NJG2 315 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 EIF3CLB5ME19 914 aaKnown RBP9.26□□□□□ -0.93
TRAF3-209ENST00000560463 MEFVO15553 781 aaPredicted RBP9.26□□□□□ -0.93
TRAF3-209ENST00000560463 RECQL4O94761 1208 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 GFPT2O94808 682 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 NDUFA10O95299 355 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 IPO7O95373 1038 aaKnown RBP9.26□□□□□ -0.93
TRAF3-209ENST00000560463 LCA5LO95447 670 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 CST3P01034 146 aaPredicted RBP9.26□□□□□ -0.93
TRAF3-209ENST00000560463 NFICP08651 508 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 CCDC175P0C221 793 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 ITGA4P13612 1032 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 KCNE1P15382 129 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 YWHAEP62258 255 aaKnown RBP9.26□□□□□ -0.93
TRAF3-209ENST00000560463 NOP14P78316 857 aaKnown RBP9.26□□□□□ -0.93
TRAF3-209ENST00000560463 KRT83P78385 493 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 KLHL30Q0D2K2 578 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 ZBTB6Q15916 424 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 ARHGAP44Q17R89 818 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 HGSNATQ68CP4 663 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 GJB7Q6PEY0 223 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 RAD9BQ6WBX8 426 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 LRRC8DQ7L1W4 858 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 VPS36Q86VN1 386 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 ARHGEF19Q8IW93 802 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 TXLNBQ8N3L3 684 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 BEST2Q8NFU1 509 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 HELQQ8TDG4 1101 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 SHC3Q92529 594 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 APBB2Q92870 758 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 TATDN2Q93075 761 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 PGBD4Q96DM1 585 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 KIF12Q96FN5 646 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 EIF3CQ99613 913 aaKnown RBP9.26□□□□□ -0.93
TRAF3-209ENST00000560463 IFIH1Q9BYX4 1025 aaKnown RBP9.26□□□□□ -0.93
TRAF3-209ENST00000560463 GPR88Q9GZN0 384 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 DEF6Q9H4E7 631 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 VRTNQ9H8Y1 702 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 PRDM10Q9NQV6 1147 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 DPP3Q9NY33 737 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 ARHGAP20Q9P2F6 1191 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 PARP2Q9UGN5 583 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 UBQLN1Q9UMX0 589 aaKnown RBP9.26□□□□□ -0.93
TRAF3-209ENST00000560463 GIT1Q9Y2X7 761 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 VWA8A3KMH1 1905 aa9.26□□□□□ -0.93
TRAF3-209ENST00000560463 ZNF638Q14966 1978 aaKnown RBP9.25□□□□□ -0.93
TRAF3-209ENST00000560463 FOXN3O00409 490 aaPredicted RBP9.25□□□□□ -0.93
TRAF3-209ENST00000560463 AKR1B10O60218 316 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 EVI5O60447 810 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 PQBP1O60828 265 aaKnown RBP9.25□□□□□ -0.93
TRAF3-209ENST00000560463 LRRN2O75325 713 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 OFD1O75665 1012 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 EOMESO95936 686 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 TUBB4AP04350 444 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 ITGB3P05106 788 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 P4HA1P13674 534 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 AKAP5P24588 427 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 BPIFB4P59827 614 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 RBP5P82980 135 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 MYO1EQ12965 1108 aa9.25□□□□□ -0.93
TRAF3-209ENST00000560463 CUL2Q13617 745 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms