RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TPGS2Q68CL5 300 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 SLFN12LQ6IEE8 588 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 SLC8B1Q6J4K2 584 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 ZNF280DQ6N043 979 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 CCDC73Q6ZRK6 1079 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 GET4Q7L5D6 327 aaPredicted RBP15.35■□□□□ 0.05
TPM1-223ENST00000560445 ELMOD1Q8N336 334 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 CEP120Q8N960 986 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 SLC7A14Q8TBB6 771 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 CACNG4Q9UBN1 327 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 TBX20Q9UMR3 447 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 CDY1Q9Y6F8 540 aa15.35■□□□□ 0.05
TPM1-223ENST00000560445 KMT2EQ8IZD2 1858 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 ABLIM1O14639 778 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 PRRG1O14668 218 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 OGTO15294 1046 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 LRG1P02750 347 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 SRFP11831 508 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 LAMP2P13473 410 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 GAP43P17677 238 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 TKTP29401 623 aaKnown RBP15.34■□□□□ 0.05
TPM1-223ENST00000560445 DDIT3P35638 169 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 POU5F1Q01860 360 aaKnown RBP15.34■□□□□ 0.05
TPM1-223ENST00000560445 DHX8Q14562 1220 aaKnown RBP15.34■□□□□ 0.05
TPM1-223ENST00000560445 KARSQ15046 597 aaKnown RBP15.34■□□□□ 0.05
TPM1-223ENST00000560445 VARS2Q5ST30 1063 aaKnown RBP15.34■□□□□ 0.05
TPM1-223ENST00000560445 ASTLQ6HA08 431 aaPredicted RBP15.34■□□□□ 0.05
TPM1-223ENST00000560445 ZNF461Q8TAF7 563 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 SUSD3Q96L08 255 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 RTP3Q9BQQ7 232 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 MSTO1Q9BUK6 570 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 LRRC27Q9C0I9 530 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 ST6GALNAC4Q9H4F1 302 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 RPF1Q9H9Y2 349 aaKnown RBP15.34■□□□□ 0.05
TPM1-223ENST00000560445 WNT16Q9UBV4 365 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 CDH7Q9ULB5 785 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 POLIQ9UNA4 740 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 EXOC7Q9UPT5 735 aa15.34■□□□□ 0.05
TPM1-223ENST00000560445 SRPRBQ9Y5M8 271 aaKnown RBP15.34■□□□□ 0.05
TPM1-223ENST00000560445 VWA8A3KMH1 1905 aa15.33■□□□□ 0.05
TPM1-223ENST00000560445 K7ELQ4 463 aaPredicted RBP15.33■□□□□ 0.04
TPM1-223ENST00000560445 SYT1P21579 422 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 ALCAMQ13740 583 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 POSTNQ15063 836 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 ARSHQ5FYA8 562 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 RRAGBQ5VZM2 374 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 MAP4K3Q8IVH8 894 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 LEMD2Q8NC56 503 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 BEST2Q8NFU1 509 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 KIF12Q96FN5 646 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 GOLGA2P5Q9HBQ8 144 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 PCDHB8Q9UN66 801 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 DERAQ9Y315 318 aa15.33■□□□□ 0.04
TPM1-223ENST00000560445 PDCD11Q14690 1871 aaKnown RBP15.33■□□□□ 0.04
TPM1-223ENST00000560445 ZNF197O14709 1029 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 HSP90AA1P07900 732 aaKnown RBP15.32■□□□□ 0.04
TPM1-223ENST00000560445 CXCL8P10145 99 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 LRPAP1P30533 357 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 PLD1Q13393 1074 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 MCM6Q14566 821 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 SLC10A6Q3KNW5 377 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 CTXN3Q4LDR2 81 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 PABPC1LQ4VXU2 614 aaKnown RBP15.32■□□□□ 0.04
TPM1-223ENST00000560445 STXBP4Q6ZWJ1 553 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 SV2BQ7L1I2 683 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 GRASPQ7Z6J2 395 aaPredicted RBP15.32■□□□□ 0.04
TPM1-223ENST00000560445 USP37Q86T82 979 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 SHDQ96IW2 340 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 ZNF396Q96N95 335 aaPredicted RBP15.32■□□□□ 0.04
TPM1-223ENST00000560445 ZMAT2Q96NC0 199 aaKnown RBP15.32■□□□□ 0.04
TPM1-223ENST00000560445 MYADMQ96S97 322 aa15.32■□□□□ 0.04
TPM1-223ENST00000560445 NPHP3-ACAD11A0A0J9YXS1 232 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 TTC26A0AVF1 554 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 ANHXE9PGG2 379 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 CCL16O15467 120 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 GALR2O43603 387 aaPredicted RBP15.31■□□□□ 0.04
TPM1-223ENST00000560445 MYBP10242 640 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 ATF2P15336 505 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 STAT6P42226 847 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 BRCC3P46736 316 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 GTF2BQ00403 316 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 PFKPQ01813 784 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 ROR1Q01973 937 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 YWHAHQ04917 246 aaPredicted RBP15.31■□□□□ 0.04
TPM1-223ENST00000560445 SOX4Q06945 474 aaPredicted RBP15.31■□□□□ 0.04
TPM1-223ENST00000560445 RESTQ13127 1097 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 IQCEQ6IPM2 695 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 SIX5Q8N196 739 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 SLC44A3Q8N4M1 653 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 C3orf58Q8NDZ4 430 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 FLCNQ8NFG4 579 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 ZBTB45Q96K62 511 aaPredicted RBP15.31■□□□□ 0.04
TPM1-223ENST00000560445 CXCL16Q9H2A7 254 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 ASB7Q9H672 318 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 AVENQ9NQS1 362 aaPredicted RBP15.31■□□□□ 0.04
TPM1-223ENST00000560445 GDE1Q9NZC3 331 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 FBXO2Q9UK22 296 aaPredicted RBP15.31■□□□□ 0.04
TPM1-223ENST00000560445 MRPS23Q9Y3D9 190 aaKnown RBP15.31■□□□□ 0.04
TPM1-223ENST00000560445 DOCK8Q8NF50 2099 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms