RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 NFRKBQ6P4R8 1299 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 RASSF3Q86WH2 238 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 DCP1BQ8IZD4 617 aaKnown RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 DCTN3O75935 186 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 HIF1AQ16665 826 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 MEI1Q5TIA1 1274 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 ATPAF2Q8N5M1 289 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 ANO9A1A5B4 782 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 IRF1P10914 325 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 ZFATQ9P243 1243 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 DIP2BQ9P265 1576 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 FOXN1O15353 648 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 LRG1P02750 347 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 SNCBQ16143 134 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 SENP7Q9BQF6 1050 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 TSSK1BQ9BXA7 367 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 CAPN11Q9UMQ6 739 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 LMTK2Q8IWU2 1503 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 ACADSBP45954 432 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 SNF8Q96H20 258 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 FAM49BQ9NUQ9 324 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 KITP10721 976 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 ARHGEF7Q14155 803 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 SMAD1Q15797 465 aaKnown RBP14.18□□□□□ -0.14
TRAF3-208ENST00000560371 KRT80Q6KB66 452 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 ZBED8Q8IZ13 594 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 TARS2Q9BW92 718 aaKnown RBP14.18□□□□□ -0.14
TRAF3-208ENST00000560371 PCDHGB4Q9UN71 923 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 DIAPH2O60879 1101 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 MYBP10242 640 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 AKT1P31749 480 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 VCPP55072 806 aaKnown RBP14.18□□□□□ -0.14
TRAF3-208ENST00000560371 DEUP1Q05D60 604 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 ZC2HC1CQ53FD0 456 aaPredicted RBP14.18□□□□□ -0.14
TRAF3-208ENST00000560371 ZBTB41Q5SVQ8 909 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 C1orf54Q8WWF1 131 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 ATXN7L3BQ96GX2 97 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 CACNA1FO60840 1977 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 MYMKA6NI61 221 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 MAPRE1Q15691 268 aaKnown RBP14.18□□□□□ -0.14
TRAF3-208ENST00000560371 PLEKHH3Q7Z736 793 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 TRIM45Q9H8W5 580 aaPredicted RBP14.18□□□□□ -0.14
TRAF3-208ENST00000560371 CLCA2Q9UQC9 943 aa14.18□□□□□ -0.14
TRAF3-208ENST00000560371 SYNDIG1LA6NDD5 238 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 TLR2O60603 784 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 E2F6O75461 281 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 DDX47Q9H0S4 455 aaKnown RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 ABI2Q9NYB9 513 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 PRG3Q9Y2Y8 225 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 AGLP35573 1532 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 GPR182O15218 404 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 GRAP2O75791 330 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 NPTXRO95502 500 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 FAM200BP0CF97 657 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 RASIP1Q5U651 963 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 RDM1Q8NG50 284 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 ABCB6Q9NP58 842 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 NAGPAQ9UK23 515 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 GFAPP14136 432 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 NRBF2Q96F24 287 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 TEX12Q9BXU0 123 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 FAM96AQ9H5X1 160 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 INTUQ9ULD6 942 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 WEE2P0C1S8 567 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 DDX5P17844 614 aaKnown RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 ARHGAP15Q53QZ3 475 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 KCTD17Q8N5Z5 321 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 PPHLN1Q8NEY8 458 aaKnown RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 MCEEQ96PE7 176 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 YME1L1Q96TA2 773 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 KDM4CQ9H3R0 1056 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 FAM95CA0A1B0GW59 222 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 PRPF4O43172 522 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 EXTL3O43909 919 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 MMEP08473 750 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 PDCD2Q16342 344 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 SYT2Q8N9I0 419 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 RBBP8NLQ8NC74 664 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 C17orf75Q9HAS0 396 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 TMEM8AQ9HCN3 771 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 EPB41L4AQ9HCS5 686 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 CHGBP05060 677 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 TMEM132BQ14DG7 1078 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 HSP90AA5PQ58FG0 334 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 RCOR2Q8IZ40 523 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 SLC7A14Q8TBB6 771 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 THOC1Q96FV9 657 aaKnown RBP14.17□□□□□ -0.14
TRAF3-208ENST00000560371 BTBD6Q96KE9 485 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 TAAR1Q96RJ0 339 aa14.17□□□□□ -0.14
TRAF3-208ENST00000560371 EIF3DO15371 548 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 SESN2P58004 480 aaPredicted RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 SNRPFP62306 86 aaKnown RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 COLEC11Q9BWP8 271 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 PCDHB2Q9Y5E7 798 aa14.16□□□□□ -0.14
TRAF3-208ENST00000560371 CTIFO43310 598 aaKnown RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 DNAJC8O75937 253 aaPredicted RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 PCSK9Q8NBP7 692 aaKnown RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 RNPC3Q96LT9 517 aaKnown RBP14.16□□□□□ -0.14
TRAF3-208ENST00000560371 CATSPERBQ9H7T0 1116 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms