RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TRAIPQ9BWF2 469 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 MLXIPLQ9NP71 852 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 AGAP1Q9UPQ3 857 aa17.67■□□□□ 0.42
SPG11-215ENST00000559193 THAP12O43422 761 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 PROSCO94903 275 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 RALAP11233 206 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 ATP5DP30049 168 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 MAP2K2P36507 400 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 MON1BQ7L1V2 547 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 TAS1R3Q7RTX0 852 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 ANKRD42Q8N9B4 389 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 CCDC63Q8NA47 563 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 ATL2Q8NHH9 583 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 CEP170P1Q96L14 293 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 HEMGNQ9BXL5 484 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 MOV10L1Q9BXT6 1211 aaKnown RBP17.66■□□□□ 0.42
SPG11-215ENST00000559193 MAP3K20Q9NYL2 800 aaKnown RBP17.66■□□□□ 0.42
SPG11-215ENST00000559193 ANAPC5Q9UJX4 755 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 USP15Q9Y4E8 981 aaPredicted RBP17.66■□□□□ 0.42
SPG11-215ENST00000559193 PCDHB2Q9Y5E7 798 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 TCEA3O75764 348 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 STBD1O95210 358 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 CYP1A1P04798 512 aaPredicted RBP17.66■□□□□ 0.42
SPG11-215ENST00000559193 CETPP11597 493 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 ADCY8P40145 1251 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 CAV1Q03135 178 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 CENPCQ03188 943 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 PTP4A2Q12974 167 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 CYP4X1Q8N118 509 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 TRIM11Q96F44 468 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 MYCBPQ99417 103 aaPredicted RBP17.66■□□□□ 0.42
SPG11-215ENST00000559193 FAM118BQ9BPY3 351 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 GEMIN8Q9NWZ8 242 aaKnown RBP17.66■□□□□ 0.42
SPG11-215ENST00000559193 GABBR1Q9UBS5 961 aa17.66■□□□□ 0.42
SPG11-215ENST00000559193 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.66■□□□□ 0.42
SPG11-215ENST00000559193 UBOX5O94941 541 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 GH1P01241 217 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 GARTP22102 1010 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 NSFP46459 744 aaKnown RBP17.65■□□□□ 0.42
SPG11-215ENST00000559193 ZNF677Q86XU0 584 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 LPAR1Q92633 364 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 C17orf75Q9HAS0 396 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 GGT7Q9UJ14 662 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 SCAF8Q9UPN6 1271 aaKnown RBP17.65■□□□□ 0.42
SPG11-215ENST00000559193 PCDHA10Q9Y5I2 948 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 ATP6V1G2O95670 118 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 CFHP08603 1231 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 WNT7BP56706 349 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 TAS2R40P59535 323 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 ENPEPQ07075 957 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 NBPF9Q3BBW0 867 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.65■□□□□ 0.42
SPG11-215ENST00000559193 CKAP2Q8WWK9 683 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 KCNK9Q9NPC2 374 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 XPNPEP1Q9NQW7 623 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 TELO2Q9Y4R8 837 aa17.65■□□□□ 0.42
SPG11-215ENST00000559193 BRAFP15056 766 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 HSPA1LP34931 641 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 BRDTQ58F21 947 aaPredicted RBP17.64■□□□□ 0.41
SPG11-215ENST00000559193 ARHGEF16Q5VV41 709 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 NUGGCQ68CJ6 796 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 SPOPLQ6IQ16 392 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 ANKS1BQ7Z6G8 1248 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 CEP57Q86XR8 500 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 RDM1Q8NG50 284 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 GDAP1Q8TB36 358 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 BICD1Q96G01 975 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 LGALS13Q9UHV8 139 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 MCM8Q9UJA3 840 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 FDX1P10109 184 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 NCALDP61601 193 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 IRX3P78415 501 aaPredicted RBP17.64■□□□□ 0.41
SPG11-215ENST00000559193 C11orf70Q9BRQ4 267 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 KIAA1683Q9H0B3 1180 aa17.64■□□□□ 0.41
SPG11-215ENST00000559193 PSTPIP1O43586 416 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 HLA-DRAP01903 254 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 DSG3P32926 999 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 GALNTL6Q49A17 601 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 TDRD10Q5VZ19 366 aaKnown RBP17.63■□□□□ 0.41
SPG11-215ENST00000559193 TBC1D1Q86TI0 1168 aaPredicted RBP17.63■□□□□ 0.41
SPG11-215ENST00000559193 LARGE2Q8N3Y3 721 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 FAM212AQ96EL1 285 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 SENP7Q9BQF6 1050 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 NOD2Q9HC29 1040 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 PDLIM7Q9NR12 457 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 ARID2Q68CP9 1835 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 PTPRJQ12913 1337 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 CFAP73A6NFT4 308 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 ACO1P21399 889 aaKnown RBP17.63■□□□□ 0.41
SPG11-215ENST00000559193 CLDN10P78369 228 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 CCNG2Q16589 344 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 ZACNQ401N2 412 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 IZUMO3Q5VZ72 239 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 SEPT14Q6ZU15 432 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 PRUNE1Q86TP1 453 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 NLRX1Q86UT6 975 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 PASD1Q8IV76 773 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 RHOT1Q8IXI2 618 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 MTMR14Q8NCE2 650 aa17.63■□□□□ 0.41
SPG11-215ENST00000559193 TCP11Q8WWU5 503 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms