RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 HASPINQ8TF76 798 aa8.64□□□□□ -1.03
HMG20A-208ENST00000559099 FNBP1Q96RU3 617 aa8.64□□□□□ -1.03
HMG20A-208ENST00000559099 ARID3AQ99856 593 aa8.64□□□□□ -1.03
HMG20A-208ENST00000559099 RNF41Q9H4P4 317 aaPredicted RBP8.64□□□□□ -1.03
HMG20A-208ENST00000559099 FBRSL1Q9HCM7 1045 aaKnown RBP8.64□□□□□ -1.03
HMG20A-208ENST00000559099 ZSWIM5Q9P217 1185 aa8.64□□□□□ -1.03
HMG20A-208ENST00000559099 SLC6A14Q9UN76 642 aa8.64□□□□□ -1.03
HMG20A-208ENST00000559099 PCDHB9Q9Y5E1 797 aa8.64□□□□□ -1.03
HMG20A-208ENST00000559099 POLQO75417 2590 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 PLXND1Q9Y4D7 1925 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 ZNF316A6NFI3 1004 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-208ENST00000559099 ZNF197O14709 1029 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 TADA2AO75478 443 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 KIF4AO95239 1232 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 ITPKAP23677 461 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 CXADRP78310 365 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 CACNB1Q02641 598 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-208ENST00000559099 TLE3Q04726 772 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 GFPT1Q06210 699 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-208ENST00000559099 SLC14A1Q13336 389 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 HSP90AA2PQ14568 343 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-208ENST00000559099 SEC23AQ15436 765 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 TEAD2Q15562 447 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 C4orf17Q53FE4 359 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 LRRC69Q6ZNQ3 347 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 PDZD4Q76G19 769 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-208ENST00000559099 PRICKLE2Q7Z3G6 844 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 RASSF3Q86WH2 238 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 GPIHBP1Q8IV16 184 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 KSR1Q8IVT5 923 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 FRMD1Q8N878 549 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 RPLP0P6Q8NHW5 317 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 PI4K2BQ8TCG2 481 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 EZH1Q92800 747 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-208ENST00000559099 E2F7Q96AV8 911 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 UBN1Q9NPG3 1134 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 PCOLCE2Q9UKZ9 415 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 PCDHA6Q9UN73 950 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 HES2Q9Y543 173 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 IPPQ9Y573 584 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 PCDHA8Q9Y5H6 950 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 STK24Q9Y6E0 443 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 CDY1Q9Y6F8 540 aa8.63□□□□□ -1.03
HMG20A-208ENST00000559099 NUP210Q8TEM1 1887 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-208ENST00000559099 SPENQ96T58 3664 aaKnown RBP8.63□□□□□ -1.03
HMG20A-208ENST00000559099 A0A0D9SFI3 127 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 OTOL1A6NHN0 477 aaPredicted RBP8.62□□□□□ -1.03
HMG20A-208ENST00000559099 MEIS1O00470 390 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 ARHGAP33O14559 1287 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 TRDMT1O14717 391 aaKnown RBP8.62□□□□□ -1.03
HMG20A-208ENST00000559099 TERTO14746 1132 aaKnown RBP8.62□□□□□ -1.03
HMG20A-208ENST00000559099 LRG1P02750 347 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 SERPINF2P08697 491 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 ITGA4P13612 1032 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 HOXD12P35452 270 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 EPHA5P54756 1037 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 SPIRE1Q08AE8 756 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 GRSF1Q12849 480 aaKnown RBP eCLIP8.62□□□□□ -1.03
HMG20A-208ENST00000559099 CEP55Q53EZ4 464 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 IFIT1BQ5T764 474 aaKnown RBP8.62□□□□□ -1.03
HMG20A-208ENST00000559099 NAIF1Q69YI7 327 aaPredicted RBP8.62□□□□□ -1.03
HMG20A-208ENST00000559099 ZNF746Q6NUN9 644 aaPredicted RBP8.62□□□□□ -1.03
HMG20A-208ENST00000559099 ZNF589Q86UQ0 364 aaPredicted RBP8.62□□□□□ -1.03
HMG20A-208ENST00000559099 OLIG1Q8TAK6 271 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 SHKBP1Q8TBC3 707 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 GPATCH3Q96I76 525 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 EIF2AQ9BY44 585 aaKnown RBP8.62□□□□□ -1.03
HMG20A-208ENST00000559099 PSTPIP2Q9H939 334 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 IFT122Q9HBG6 1241 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 HSPBP1Q9NZL4 362 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 MTRRQ9UBK8 725 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 GABBR1Q9UBS5 961 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 PAXBP1Q9Y5B6 917 aa8.62□□□□□ -1.03
HMG20A-208ENST00000559099 SALL3Q9BXA9 1300 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 SPDYE3A6NKU9 549 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 PLK4O00444 970 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 RRP8O43159 456 aaKnown RBP8.61□□□□□ -1.03
HMG20A-208ENST00000559099 OATP04181 439 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 ATXN1LP0C7T5 689 aaKnown RBP8.61□□□□□ -1.03
HMG20A-208ENST00000559099 HLA-EP13747 358 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 POU3F2P20265 443 aaPredicted RBP8.61□□□□□ -1.03
HMG20A-208ENST00000559099 ADSSP30520 456 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 ZNF76P36508 570 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 NT5C2P49902 561 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 TARBP2Q15633 366 aaKnown RBP8.61□□□□□ -1.03
HMG20A-208ENST00000559099 DUOXA1Q1HG43 343 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 ITPRIPL2Q3MIP1 535 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 ARHGAP29Q52LW3 1261 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 STXBP5Q5T5C0 1151 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 LYSMD4Q5XG99 296 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 ANO7Q6IWH7 933 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 LPCAT2Q7L5N7 544 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 ZNF410Q86VK4 478 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 MDGA1Q8NFP4 955 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 TSTD1Q8NFU3 115 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 BAHD1Q8TBE0 780 aaPredicted RBP8.61□□□□□ -1.03
HMG20A-208ENST00000559099 RLN3Q8WXF3 142 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 TTC9Q92623 222 aa8.61□□□□□ -1.03
HMG20A-208ENST00000559099 FAM167AQ96KS9 214 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms