RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 FBXW11Q9UKB1 542 aa12.25□□□□□ -0.45
BMP4-204ENST00000558961 CPSF3Q9UKF6 684 aaKnown RBP12.25□□□□□ -0.45
BMP4-204ENST00000558961 USTQ9Y2C2 406 aa12.25□□□□□ -0.45
BMP4-204ENST00000558961 NR2E1Q9Y466 385 aa12.25□□□□□ -0.45
BMP4-204ENST00000558961 PRR33A8MZF0 331 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 PODXLO00592 558 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 TRAPPC3O43617 180 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 PRPF40AO75400 957 aaKnown RBP12.24□□□□□ -0.45
BMP4-204ENST00000558961 CYP3A5P20815 502 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 LRPAP1P30533 357 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 KRT85P78386 507 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 POU5F1Q01860 360 aaKnown RBP12.24□□□□□ -0.45
BMP4-204ENST00000558961 PPP2R3AQ06190 1150 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 TCHHQ07283 1943 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 ALCAMQ13740 583 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 ENOX2Q16206 610 aaKnown RBP12.24□□□□□ -0.45
BMP4-204ENST00000558961 KLHL40Q2TBA0 621 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 TMEM31Q5JXX7 168 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 ATAT1Q5SQI0 421 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 ZBTB41Q5SVQ8 909 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 KANK3Q6NY19 840 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 TMC5Q6UXY8 1006 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 DOCK8Q8NF50 2099 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 C18orf25Q96B23 403 aaPredicted RBP12.24□□□□□ -0.45
BMP4-204ENST00000558961 RPGRIP1Q96KN7 1286 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 LRFN3Q9BTN0 628 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 SCAND2PQ9GZW5 306 aaPredicted RBP12.24□□□□□ -0.45
BMP4-204ENST00000558961 TUBGCP4Q9UGJ1 667 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 BACE2Q9Y5Z0 518 aa12.24□□□□□ -0.45
BMP4-204ENST00000558961 C2CD4DB7Z1M9 353 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 ANKRD63C9JTQ0 380 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 SYN3O14994 580 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 ZMYND10O75800 440 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 WEE2P0C1S8 567 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 RPL17P18621 184 aaKnown RBP12.23□□□□□ -0.45
BMP4-204ENST00000558961 TKTP29401 623 aaKnown RBP12.23□□□□□ -0.45
BMP4-204ENST00000558961 HOXA9P31269 272 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 MATR3P43243 847 aaKnown RBP eCLIP12.23□□□□□ -0.45
BMP4-204ENST00000558961 BRCC3P46736 316 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 AARSP49588 968 aaKnown RBP eCLIP12.23□□□□□ -0.45
BMP4-204ENST00000558961 RAB33AQ14088 237 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 L1TD1Q5T7N2 865 aaKnown RBP12.23□□□□□ -0.45
BMP4-204ENST00000558961 SLFN12LQ6IEE8 588 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 ANKS3Q6ZW76 656 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 CEP57Q86XR8 500 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 CD302Q8IX05 232 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 ZDHHC14Q8IZN3 488 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 PDILTQ8N807 584 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 GPT2Q8TD30 523 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 LEO1Q8WVC0 666 aaPredicted RBP12.23□□□□□ -0.45
BMP4-204ENST00000558961 ZNF707Q96C28 371 aaPredicted RBP12.23□□□□□ -0.45
BMP4-204ENST00000558961 SUSD3Q96L08 255 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 TRIM9Q9C026 710 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 MRPL44Q9H9J2 332 aaKnown RBP12.23□□□□□ -0.45
BMP4-204ENST00000558961 MAGEF1Q9HAY2 307 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 CFAP45Q9UL16 551 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 UBQLN1Q9UMX0 589 aaKnown RBP12.23□□□□□ -0.45
BMP4-204ENST00000558961 TECTAO75443 2155 aa12.23□□□□□ -0.45
BMP4-204ENST00000558961 CCDC195A0A1B0GUA6 201 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 TISP43B9A030 160 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 ADAM12O43184 909 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 TBC1D4O60343 1298 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 GADD45BO75293 160 aaPredicted RBP12.22□□□□□ -0.45
BMP4-204ENST00000558961 RFPL2O75678 378 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 POU2F2P09086 479 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 ADSSP30520 456 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 CASP5P51878 434 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 KCNA1Q09470 495 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 MRPL58Q14197 206 aaKnown RBP12.22□□□□□ -0.45
BMP4-204ENST00000558961 PTPN21Q16825 1174 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 RESP18Q5W5W9 173 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 SLC8B1Q6J4K2 584 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 CCDC149Q6ZUS6 474 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 RTL10Q7L3V2 364 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 PALB2Q86YC2 1186 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 TDRD5Q8NAT2 981 aaKnown RBP12.22□□□□□ -0.45
BMP4-204ENST00000558961 KREMEN2Q8NCW0 462 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 EDAQ92838 391 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 MSTO1Q9BUK6 570 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 LRRC27Q9C0I9 530 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 ASB7Q9H672 318 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 RPF1Q9H9Y2 349 aaKnown RBP12.22□□□□□ -0.45
BMP4-204ENST00000558961 GDPD2Q9HCC8 539 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 WDR6Q9NNW5 1121 aaKnown RBP12.22□□□□□ -0.45
BMP4-204ENST00000558961 PANK4Q9NVE7 773 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 PCDHA7Q9UN72 937 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 DERAQ9Y315 318 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 KMT2EQ8IZD2 1858 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 TRIOO75962 3097 aa12.22□□□□□ -0.45
BMP4-204ENST00000558961 CLUHO75153 1309 aa12.21□□□□□ -0.45
BMP4-204ENST00000558961 FAM86C2PA6NEL3 165 aa12.21□□□□□ -0.45
BMP4-204ENST00000558961 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
BMP4-204ENST00000558961 LACTBL1A8MY62 500 aa12.21□□□□□ -0.45
BMP4-204ENST00000558961 I3L4J1 428 aa12.21□□□□□ -0.45
BMP4-204ENST00000558961 M0QZQ0 153 aa12.21□□□□□ -0.45
BMP4-204ENST00000558961 XPOTO43592 962 aaKnown RBP12.21□□□□□ -0.45
BMP4-204ENST00000558961 GCNT3O95395 438 aa12.21□□□□□ -0.45
BMP4-204ENST00000558961 HNRNPA1P09651 372 aaKnown RBP eCLIP12.21□□□□□ -0.45
BMP4-204ENST00000558961 IDEP14735 1019 aa12.21□□□□□ -0.45
BMP4-204ENST00000558961 UBE2HP62256 183 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms