RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 SLC7A5Q01650 507 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 SMAD4Q13485 552 aaKnown RBP5.71□□□□□ -1.5
SPG21-208ENST00000558943 RTP5Q14D33 572 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 EPC2Q52LR7 807 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 ZNF394Q53GI3 561 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 UBXN11Q5T124 520 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 IQSEC1Q6DN90 963 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 SNRNP48Q6IEG0 339 aaKnown RBP5.71□□□□□ -1.5
SPG21-208ENST00000558943 ARMCX2Q7L311 632 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 RPAINQ86UA6 219 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 CERS3Q8IU89 383 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 CARFQ8N187 725 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 ARHGEF39Q8N4T4 335 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 MAGEB6Q8N7X4 407 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.71□□□□□ -1.5
SPG21-208ENST00000558943 CHAMP1Q96JM3 812 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 SAMD11Q96NU1 681 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 TEX13BQ9BXU2 312 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 USP44Q9H0E7 712 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.71□□□□□ -1.5
SPG21-208ENST00000558943 CD207Q9UJ71 328 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 Q9Y3F1 56 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 CACNA1GO43497 2377 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 IL16Q14005 1332 aa5.71□□□□□ -1.5
SPG21-208ENST00000558943 C5orf42Q9H799 3197 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.7□□□□□ -1.5
SPG21-208ENST00000558943 H3BNC9 293 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 K7ESM1 405 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 ZBED4O75132 1171 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 MYL3P08590 195 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 UQCRFS1P1P0C7P4 283 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 NAT2P11245 290 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 PAMP19021 973 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 TACR1P25103 407 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 PMLP29590 882 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 SHMT1P34896 483 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 GIPRP48546 466 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 DYNLL1P63167 89 aaKnown RBP5.7□□□□□ -1.5
SPG21-208ENST00000558943 DEFB103AP81534 67 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 DLX2Q07687 328 aaPredicted RBP5.7□□□□□ -1.5
SPG21-208ENST00000558943 TFCP2Q12800 502 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 GNPTABQ3T906 1256 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 BRDTQ58F21 947 aaPredicted RBP5.7□□□□□ -1.5
SPG21-208ENST00000558943 KIAA1755Q5JYT7 1200 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 NT5DC1Q5TFE4 455 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 TMEM179Q6ZVK1 233 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 KIAA2013Q8IYS2 634 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 CPXCR1Q8N123 301 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 RPGRIP1Q96KN7 1286 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 RIPOR3Q96MK2 946 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 VCPKMTQ9H867 229 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 FBXO28Q9NVF7 368 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 NTMQ9P121 344 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 FBXO40Q9UH90 709 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 HDAC5Q9UQL6 1122 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 MYRFQ9Y2G1 1151 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 TMX2Q9Y320 296 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 HCFC2Q9Y5Z7 792 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 MYO9BQ13459 2157 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 ASTN1O14525 1302 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 FANCIQ9NVI1 1328 aa5.7□□□□□ -1.5
SPG21-208ENST00000558943 ZNF236Q9UL36 1845 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 C2orf71A6NGG8 1288 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 ASB14A6NK59 587 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 LOC730098B7Z3J9 87 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 SCAMP3O14828 347 aaKnown RBP5.69□□□□□ -1.5
SPG21-208ENST00000558943 NPHS1O60500 1241 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 IGSF3O75054 1194 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 PARNO95453 639 aaKnown RBP5.69□□□□□ -1.5
SPG21-208ENST00000558943 AMHP03971 560 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 NDUFV1P49821 464 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 CPT1AP50416 773 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 PLCD1P51178 756 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 ZNF143P52747 638 aaPredicted RBP5.69□□□□□ -1.5
SPG21-208ENST00000558943 ACAP1Q15027 740 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 ZXDCQ2QGD7 858 aaPredicted RBP5.69□□□□□ -1.5
SPG21-208ENST00000558943 WWC2Q6AWC2 1192 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 RUFY4Q6ZNE9 571 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 ADGRA1Q86SQ6 560 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 AFAP1L1Q8TED9 768 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 SPATA25Q9BR10 227 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 MTG1Q9BT17 334 aaPredicted RBP5.69□□□□□ -1.5
SPG21-208ENST00000558943 MTA3Q9BTC8 594 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 CGGBP1Q9UFW8 167 aaPredicted RBP5.69□□□□□ -1.5
SPG21-208ENST00000558943 PA2G4Q9UQ80 394 aaKnown RBP5.69□□□□□ -1.5
SPG21-208ENST00000558943 RIPK3Q9Y572 518 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 PCDHGB7Q9Y5F8 929 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 COL4A6Q14031 1691 aa5.69□□□□□ -1.5
SPG21-208ENST00000558943 PTPRZ1P23471 2315 aaPredicted RBP5.68□□□□□ -1.5
SPG21-208ENST00000558943 PRICKLE3O43900 615 aaPredicted RBP5.68□□□□□ -1.5
SPG21-208ENST00000558943 NOBOXO60393 691 aa5.68□□□□□ -1.5
SPG21-208ENST00000558943 KPNA6O60684 536 aa5.68□□□□□ -1.5
SPG21-208ENST00000558943 UBTFL1P0CB47 393 aaPredicted RBP5.68□□□□□ -1.5
SPG21-208ENST00000558943 ICAM3P32942 547 aa5.68□□□□□ -1.5
SPG21-208ENST00000558943 RACK1P63244 317 aaKnown RBP5.68□□□□□ -1.5
SPG21-208ENST00000558943 ICA1Q05084 483 aa5.68□□□□□ -1.5
SPG21-208ENST00000558943 HYAL1Q12794 435 aa5.68□□□□□ -1.5
SPG21-208ENST00000558943 PPP2R5DQ14738 602 aa5.68□□□□□ -1.5
SPG21-208ENST00000558943 PTGISQ16647 500 aa5.68□□□□□ -1.5
SPG21-208ENST00000558943 PTPN21Q16825 1174 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms