RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 STK24Q9Y6E0 443 aa14.83□□□□□ -0.04
VPS18-203ENST00000558855 TICRRQ7Z2Z1 1910 aa14.83□□□□□ -0.04
VPS18-203ENST00000558855 VNN2O95498 520 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 HNRNPA1P09651 372 aaKnown RBP eCLIP14.82□□□□□ -0.04
VPS18-203ENST00000558855 SRFP11831 508 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 PLCG1P19174 1290 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 HOXA9P31269 272 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 CLCN5P51795 746 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 YARSP54577 528 aaKnown RBP14.82□□□□□ -0.04
VPS18-203ENST00000558855 MCL1Q07820 350 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 ELAVL2Q12926 359 aaKnown RBP14.82□□□□□ -0.04
VPS18-203ENST00000558855 MRPL58Q14197 206 aaKnown RBP14.82□□□□□ -0.04
VPS18-203ENST00000558855 SPECC1Q5M775 1068 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 LIN9Q5TKA1 542 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 ARL6IP4Q66PJ3 421 aaKnown RBP14.82□□□□□ -0.04
VPS18-203ENST00000558855 GPBP1Q86WP2 473 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 NPAS3Q8IXF0 933 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 STAMQ92783 540 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 ATOH1Q92858 354 aaPredicted RBP14.82□□□□□ -0.04
VPS18-203ENST00000558855 UROC1Q96N76 676 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 ACAP3Q96P50 834 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 PRRX2Q99811 253 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 TCHPQ9BT92 498 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 C17orf75Q9HAS0 396 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 DPP7Q9UHL4 492 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 FBXL21Q9UKT6 434 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 RBM19Q9Y4C8 960 aaKnown RBP14.82□□□□□ -0.04
VPS18-203ENST00000558855 BACE2Q9Y5Z0 518 aa14.82□□□□□ -0.04
VPS18-203ENST00000558855 TOM1L1O75674 476 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 GLULP15104 373 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 CCR2P41597 374 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 CUL4AQ13619 759 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 SF3A1Q15459 793 aaKnown RBP14.81□□□□□ -0.04
VPS18-203ENST00000558855 LARP1BQ659C4 914 aaKnown RBP14.81□□□□□ -0.04
VPS18-203ENST00000558855 SLC8B1Q6J4K2 584 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 HAUS6Q7Z4H7 955 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 KXD1Q9BQD3 176 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 PLA2G2FQ9BZM2 168 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 TBC1D17Q9HA65 648 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 TOPORSQ9NS56 1045 aaPredicted RBP14.81□□□□□ -0.04
VPS18-203ENST00000558855 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS18-203ENST00000558855 FBXL5Q9UKA1 691 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 CDH7Q9ULB5 785 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 KIF3AQ9Y496 699 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 CLIC4Q9Y696 253 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 NCANO14594 1321 aa14.81□□□□□ -0.04
VPS18-203ENST00000558855 ZFHX2Q9C0A1 2572 aaPredicted RBP14.8□□□□□ -0.04
VPS18-203ENST00000558855 OBSL1O75147 1896 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 TTC26A0AVF1 554 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 GFRA3O60609 400 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 ABLIM3O94929 683 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 CEBPBP17676 345 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 ARPP19P56211 112 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 GPC5P78333 572 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 PTPAQ15257 358 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 ZBTB6Q15916 424 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 ELMSAN1Q6PJG2 1045 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 ZPBP2Q6X784 338 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 ANKS3Q6ZW76 656 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 FRMD5Q7Z6J6 570 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 CCDC105Q8IYK2 499 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 TCEAL4Q96EI5 215 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 SUSD3Q96L08 255 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 TIPINQ9BVW5 301 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 FOXQ1Q9C009 403 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 DLGAP2Q9P1A6 1054 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 WNT16Q9UBV4 365 aa14.8□□□□□ -0.04
VPS18-203ENST00000558855 TIMM13Q9Y5L4 95 aaPredicted RBP14.8□□□□□ -0.04
VPS18-203ENST00000558855 KIF26AQ9ULI4 1882 aaPredicted RBP14.8□□□□□ -0.04
VPS18-203ENST00000558855 SHISA7A6NL88 538 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 LACTBL1A8MY62 500 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 ANKRD63C9JTQ0 380 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 DCNP07585 359 aaKnown RBP14.79□□□□□ -0.04
VPS18-203ENST00000558855 OR4Q2P0C623 313 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 NMT1P30419 496 aaKnown RBP14.79□□□□□ -0.04
VPS18-203ENST00000558855 ZNF131P52739 623 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 STRN3Q13033 797 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 RESTQ13127 1097 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 ENOX2Q16206 610 aaKnown RBP14.79□□□□□ -0.04
VPS18-203ENST00000558855 ZC2HC1CQ53FD0 456 aaPredicted RBP14.79□□□□□ -0.04
VPS18-203ENST00000558855 HS6ST3Q8IZP7 471 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 DTWD2Q8NBA8 298 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 RAD54LQ92698 747 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 DDX12PQ92771 950 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 EPSTI1Q96J88 318 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 CDK5RAP3Q96JB5 506 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 CRISPLD1Q9H336 500 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 SLC2A4RGQ9NR83 387 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 TBX20Q9UMR3 447 aa14.79□□□□□ -0.04
VPS18-203ENST00000558855 DENND4CQ5VZ89 1909 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 ARHGEF37A1IGU5 675 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 VPS37CA5D8V6 355 aaPredicted RBP14.78□□□□□ -0.04
VPS18-203ENST00000558855 PROB1E7EW31 1015 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 K7ENM7 598 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 CLDN3O15551 220 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 MOSPD3O75425 235 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 PIGRP01833 764 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 RHOP08100 348 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 POU2F2P09086 479 aa14.78□□□□□ -0.04
VPS18-203ENST00000558855 FCARP24071 287 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms