RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TWF2Q6IBS0 349 aaKnown RBP10.83□□□□□ -0.68
SPG11-212ENST00000558790 TREML4Q6UXN2 200 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 TMC5Q6UXY8 1006 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 DDX53Q86TM3 631 aaKnown RBP10.83□□□□□ -0.68
SPG11-212ENST00000558790 CABP7Q86V35 215 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 TTC16Q8NEE8 873 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 CCDC148Q8NFR7 591 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 BRF1Q92994 677 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 CCDC136Q96JN2 1154 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 CEP89Q96ST8 783 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 RIT2Q99578 217 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 FDXACB1Q9BRP7 624 aaPredicted RBP10.83□□□□□ -0.68
SPG11-212ENST00000558790 TEKT3Q9BXF9 490 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 RBCK1Q9BYM8 510 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
SPG11-212ENST00000558790 NRDE2Q9H7Z3 1164 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 SFXN1Q9H9B4 322 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 CHST12Q9NRB3 414 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 NRBP2Q9NSY0 501 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 VPS54Q9P1Q0 977 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 FNDC3AQ9Y2H6 1198 aaKnown RBP10.83□□□□□ -0.68
SPG11-212ENST00000558790 MAST4O15021 2626 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 IGKV6-21A0A0C4DH24 114 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 PRPF3O43395 683 aaKnown RBP10.82□□□□□ -0.68
SPG11-212ENST00000558790 PI15O43692 258 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 STBD1O95210 358 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 GALTP07902 379 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 SLC11A1P49279 550 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 RNASELQ05823 741 aaKnown RBP10.82□□□□□ -0.68
SPG11-212ENST00000558790 GIT2Q14161 759 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 BMS1Q14692 1282 aaKnown RBP10.82□□□□□ -0.68
SPG11-212ENST00000558790 ACAP1Q15027 740 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 NOMO2Q5JPE7 1267 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 ATAT1Q5SQI0 421 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 GLB1LQ6UWU2 654 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 Q6ZUG5 572 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 CCDC149Q6ZUS6 474 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 ZNF438Q7Z4V0 828 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 TMEM87AQ8NBN3 555 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 FLCNQ8NFG4 579 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 BICD2Q8TD16 824 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 KCNG4Q8TDN1 519 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 RSPH1Q8WYR4 309 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 NLRP4Q96MN2 994 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 FAM129BQ96TA1 746 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 GBP3Q9H0R5 595 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 CYP26B1Q9NR63 512 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 FAM105AQ9NUU6 356 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 TMEM63CQ9P1W3 806 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
SPG11-212ENST00000558790 R4GN57 208 aa10.82□□□□□ -0.68
SPG11-212ENST00000558790 ITPR1Q14643 2758 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 SMG1Q96Q15 3661 aaKnown RBP10.81□□□□□ -0.68
SPG11-212ENST00000558790 OFD1O75665 1012 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 PSMD10O75832 226 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 TDP2O95551 362 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 SSBP05455 408 aaKnown RBP eCLIP10.81□□□□□ -0.68
SPG11-212ENST00000558790 HMGB1P09429 215 aaKnown RBP10.81□□□□□ -0.68
SPG11-212ENST00000558790 RARAP10276 462 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 CLCN4P51793 760 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 CLCN5P51795 746 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 NTRK3Q16288 839 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 PLA2G4FQ68DD2 849 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 B3GNT9Q6UX72 402 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 MIER3Q7Z3K6 550 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 GPR149Q86SP6 731 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 SYT9Q86SS6 491 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 ZNF410Q86VK4 478 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 ZNF280BQ86YH2 543 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 RHPN2Q8IUC4 686 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 KSR1Q8IVT5 923 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 RDM1Q8NG50 284 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 JAKMIP1Q96N16 626 aaKnown RBP10.81□□□□□ -0.68
SPG11-212ENST00000558790 SLC26A6Q9BXS9 759 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 RNF26Q9BY78 433 aaPredicted RBP10.81□□□□□ -0.68
SPG11-212ENST00000558790 AGPAT5Q9NUQ2 364 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 SUCLA2Q9P2R7 463 aaPredicted RBP10.81□□□□□ -0.68
SPG11-212ENST00000558790 DUSP12Q9UNI6 340 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 COL4A3Q01955 1670 aa10.81□□□□□ -0.68
SPG11-212ENST00000558790 LOC400499M0QZD8 3231 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 LMNAP02545 664 aaKnown RBP10.8□□□□□ -0.68
SPG11-212ENST00000558790 RPLP1P05386 114 aaKnown RBP10.8□□□□□ -0.68
SPG11-212ENST00000558790 CNPP09543 421 aaKnown RBP10.8□□□□□ -0.68
SPG11-212ENST00000558790 AOC1P19801 751 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 RAB27AP51159 221 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 USP11P51784 963 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 AFF1P51825 1210 aaKnown RBP10.8□□□□□ -0.68
SPG11-212ENST00000558790 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
SPG11-212ENST00000558790 ANGPT1Q15389 498 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 Q4G0T1 1027 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 XKR3Q5GH77 459 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 ZNF468Q5VIY5 522 aaPredicted RBP10.8□□□□□ -0.68
SPG11-212ENST00000558790 ANO5Q75V66 913 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 OTOP3Q7RTS5 596 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 CATSPER4Q7RTX7 472 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 PPFIBP1Q86W92 1011 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 CCDC105Q8IYK2 499 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 ETNPPLQ8TBG4 499 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 TBCKQ8TEA7 893 aa10.8□□□□□ -0.68
SPG11-212ENST00000558790 ACSF2Q96CM8 615 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms