RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DCTN4Q9UJW0 460 aa6.52□□□□□ -1.37
VPS33B-207ENST00000557470 HES2Q9Y543 173 aa6.52□□□□□ -1.37
VPS33B-207ENST00000557470 IPPQ9Y573 584 aa6.52□□□□□ -1.37
VPS33B-207ENST00000557470 NID2Q14112 1375 aa6.52□□□□□ -1.37
VPS33B-207ENST00000557470 CACNA1GO43497 2377 aa6.52□□□□□ -1.37
VPS33B-207ENST00000557470 CYP3A7-CYP3A51PA0A087WV96 503 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 KANSL1LA0AUZ9 987 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 EML1O00423 815 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 LAMTOR5O43504 91 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 WIPF1O43516 503 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 TSPAN1O60635 241 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 C1RP00736 705 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CD72P21854 359 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CYP3A7P24462 503 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 SCNN1AP37088 669 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 NTHL1P78549 312 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 FGD1P98174 961 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 AKAP17AQ02040 695 aaKnown RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CSTF1Q05048 431 aaKnown RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 UBXN2BQ14CS0 331 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 MLF2Q15773 248 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 NTRK3Q16288 839 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 USP41Q3LFD5 358 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 TSGA10IPQ3SY00 556 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 SLC44A4Q53GD3 710 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 FUT10Q6P4F1 479 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 PRSS55Q6UWB4 352 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 GRASPQ7Z6J2 395 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 NT5DC4Q86YG4 428 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CCDC116Q8IYX3 515 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 MEIOBQ8N635 442 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 RNF149Q8NC42 400 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 ATRIPQ8WXE1 791 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 PSPC1Q8WXF1 523 aaKnown RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 RABGGTAQ92696 567 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 FGF13Q92913 245 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 BRF1Q92994 677 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CPB2Q96IY4 423 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CEP170P1Q96L14 293 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 JPH2Q9BR39 696 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 APOL6Q9BWW8 343 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 SLC26A6Q9BXS9 759 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 BCO2Q9BYV7 579 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 EPC1Q9H2F5 836 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 DHX33Q9H6R0 707 aaKnown RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CCSER2Q9H7U1 834 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CAPN10Q9HC96 672 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 UBN1Q9NPG3 1134 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 FNIP2Q9P278 1114 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 KLHL42Q9P2K6 505 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 WRAP73Q9P2S5 460 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CACNG4Q9UBN1 327 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 FBXW11Q9UKB1 542 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 FBXO4Q9UKT5 387 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 CDH7Q9ULB5 785 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 SMG5Q9UPR3 1016 aaKnown RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 PCDHGA2Q9Y5H1 932 aa6.51□□□□□ -1.37
VPS33B-207ENST00000557470 ZFP37Q9Y6Q3 630 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-207ENST00000557470 PATJQ8NI35 1801 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 MYH15Q9Y2K3 1946 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 DOCK6Q96HP0 2047 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 DCDC2BA2VCK2 349 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 FAM170BA6NMN3 283 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 CCL16O15467 120 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 SLC37A4O43826 429 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 ICMTO60725 284 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 LILRB5O75023 590 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 ERLIN2O94905 339 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 TGM1P22735 817 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 AKAP5P24588 427 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 QARSP47897 775 aaKnown RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 NLRP5P59047 1200 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 CREMQ03060 361 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 LMNB2Q03252 620 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 PRKCQQ04759 706 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 GNL2Q13823 731 aaKnown RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 KRT32Q14532 448 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 EMC2Q15006 297 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 SWI5Q1ZZU3 235 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 RTP2Q5QGT7 225 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 PPP1R26Q5T8A7 1209 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 NOTUMQ6P988 496 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 TSSK4Q6SA08 328 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 Q6ZUG5 572 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 MTSS1LQ765P7 747 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 FERMT3Q86UX7 667 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 GPR65Q8IYL9 337 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 LINC00528Q8N1L1 170 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 GPR161Q8N6U8 529 aaKnown RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 ZBTB44Q8NCP5 570 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 CNNM3Q8NE01 707 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 GSTCDQ8NEC7 633 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 ITFG1Q8TB96 612 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 NELL1Q92832 810 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 CCDC51Q96ER9 411 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 MBOAT7Q96N66 472 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 KCTD15Q96SI1 283 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 KXD1Q9BQD3 176 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 COLEC11Q9BWP8 271 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms