RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 GPC5P78333 572 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 ANGPT1Q15389 498 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 PABPC1LQ4VXU2 614 aaKnown RBP17.37■□□□□ 0.37
TUBB3-213ENST00000557262 VARS2Q5ST30 1063 aaKnown RBP17.37■□□□□ 0.37
TUBB3-213ENST00000557262 SLC8B1Q6J4K2 584 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 ZPBP2Q6X784 338 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 MTSS1LQ765P7 747 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 TBC1D17Q9HA65 648 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 HCFC1R1Q9NWW0 138 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 LARSQ9P2J5 1176 aaKnown RBP17.37■□□□□ 0.37
TUBB3-213ENST00000557262 KCNH3Q9ULD8 1083 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 NUB1Q9Y5A7 615 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 DOCK6Q96HP0 2047 aa17.37■□□□□ 0.37
TUBB3-213ENST00000557262 H0YCG3 227 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 CLDN3O15551 220 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 MEFVO15553 781 aaPredicted RBP17.36■□□□□ 0.37
TUBB3-213ENST00000557262 SLC26A4O43511 780 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 TBC1D4O60343 1298 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 CD2BP2O95400 341 aaKnown RBP17.36■□□□□ 0.37
TUBB3-213ENST00000557262 MCM2P49736 904 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 ROR1Q01973 937 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 MRPL58Q14197 206 aaKnown RBP17.36■□□□□ 0.37
TUBB3-213ENST00000557262 NOLC1Q14978 699 aaKnown RBP eCLIP17.36■□□□□ 0.37
TUBB3-213ENST00000557262 TMEM119Q4V9L6 283 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 ASCL5Q7RTU5 278 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 C18orf25Q96B23 403 aaPredicted RBP17.36■□□□□ 0.37
TUBB3-213ENST00000557262 SHDQ96IW2 340 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 AK8Q96MA6 479 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 UPF2Q9HAU5 1272 aaKnown RBP17.36■□□□□ 0.37
TUBB3-213ENST00000557262 ARHGEF3Q9NR81 526 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 ANKFY1Q9P2R3 1169 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 SMC3Q9UQE7 1217 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 SIT1Q9Y3P8 196 aa17.36■□□□□ 0.37
TUBB3-213ENST00000557262 NPHP3-ACAD11A0A0J9YXS1 232 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 ARHGEF37A1IGU5 675 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 ATF2P15336 505 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 PTPN2P17706 415 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 STARD6P59095 220 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 MCL1Q07820 350 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 SEZ6Q53EL9 994 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 ARSHQ5FYA8 562 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 LARP1BQ659C4 914 aaKnown RBP17.35■□□□□ 0.37
TUBB3-213ENST00000557262 HAUS6Q7Z4H7 955 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 FRMD5Q7Z6J6 570 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 NKD2Q969F2 451 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-213ENST00000557262 SUSD3Q96L08 255 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 PLEKHA5Q9HAU0 1116 aa17.35■□□□□ 0.37
TUBB3-213ENST00000557262 MRPS23Q9Y3D9 190 aaKnown RBP17.35■□□□□ 0.37
TUBB3-213ENST00000557262 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-213ENST00000557262 WDR27A2RRH5 827 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 PRR23AA6NEV1 266 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 PRRG1O14668 218 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 LRG1P02750 347 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 RHOP08100 348 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 CLTAP09496 248 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 UBA7P41226 1012 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 MATR3P43243 847 aaKnown RBP eCLIP17.34■□□□□ 0.37
TUBB3-213ENST00000557262 ARPP19P56211 112 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 CACNB1Q02641 598 aaPredicted RBP17.34■□□□□ 0.37
TUBB3-213ENST00000557262 NPAS3Q8IXF0 933 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 TCEAL8Q8IYN2 117 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 APPL2Q8NEU8 664 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 KCNN1Q92952 543 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 CALML4Q96GE6 196 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 AVENQ9NQS1 362 aaPredicted RBP17.34■□□□□ 0.37
TUBB3-213ENST00000557262 FBXL5Q9UKA1 691 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 ODF2LQ9ULJ1 636 aa17.34■□□□□ 0.37
TUBB3-213ENST00000557262 PTPRZ1P23471 2315 aaPredicted RBP17.33■□□□□ 0.37
TUBB3-213ENST00000557262 SCP2P22307 547 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.36
TUBB3-213ENST00000557262 MCM4P33991 863 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 NCKAP1LP55160 1127 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 CTXN3Q4LDR2 81 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 SLC44A4Q53GD3 710 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 TPGS2Q68CL5 300 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 MCRS1Q96EZ8 462 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 BICD1Q96G01 975 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 TBC1D32Q96NH3 1257 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 HAPLN2Q9GZV7 340 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 CYP4F11Q9HBI6 524 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 GDE1Q9NZC3 331 aa17.33■□□□□ 0.36
TUBB3-213ENST00000557262 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.33■□□□□ 0.36
TUBB3-213ENST00000557262 TTC26A0AVF1 554 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 SEC24AO95486 1093 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 BMP15O95972 392 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 DCNP07585 359 aaKnown RBP17.32■□□□□ 0.36
TUBB3-213ENST00000557262 CXCL8P10145 99 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 PFKPQ01813 784 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 SNW1Q13573 536 aaKnown RBP17.32■□□□□ 0.36
TUBB3-213ENST00000557262 DHX8Q14562 1220 aaKnown RBP17.32■□□□□ 0.36
TUBB3-213ENST00000557262 ZBTB6Q15916 424 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 KYAT1Q16773 422 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 SPECC1Q5M775 1068 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 ZNF280DQ6N043 979 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 GPBP1Q86WP2 473 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 MYCT1Q8N699 235 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 ING5Q8WYH8 240 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 DDX12PQ92771 950 aa17.32■□□□□ 0.36
TUBB3-213ENST00000557262 KXD1Q9BQD3 176 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms