RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PDRG1Q9NUG6 133 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 KCNJ14Q9UNX9 436 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 DCHS1Q96JQ0 3298 aa9.62□□□□□ -0.87
VRK1-206ENST00000557222 CLUHO75153 1309 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 MTCL1Q9Y4B5 1905 aaKnown RBP9.61□□□□□ -0.87
VRK1-206ENST00000557222 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 SSBP05455 408 aaKnown RBP eCLIP9.61□□□□□ -0.87
VRK1-206ENST00000557222 SRFP11831 508 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 ARL2P36404 184 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 ANGPT1Q15389 498 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 WDR44Q5JSH3 913 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 LILRA6Q6PI73 481 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 RTL10Q7L3V2 364 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 TAS1R1Q7RTX1 841 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 FRMD5Q7Z6J6 570 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 SIX5Q8N196 739 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 SLC44A3Q8N4M1 653 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 SMG7Q92540 1137 aaKnown RBP9.61□□□□□ -0.87
VRK1-206ENST00000557222 ZNF707Q96C28 371 aaPredicted RBP9.61□□□□□ -0.87
VRK1-206ENST00000557222 DYDC2Q96IM9 177 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 AIFM3Q96NN9 605 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 GAD1Q99259 594 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 EIF2AQ9BY44 585 aaKnown RBP9.61□□□□□ -0.87
VRK1-206ENST00000557222 TRIM6Q9C030 488 aaPredicted RBP9.61□□□□□ -0.87
VRK1-206ENST00000557222 NT5C3AQ9H0P0 336 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 XPNPEP1Q9NQW7 623 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 RGL1Q9NZL6 768 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 PCDHA12Q9UN75 941 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 PRG3Q9Y2Y8 225 aaPredicted RBP9.61□□□□□ -0.87
VRK1-206ENST00000557222 DYRK1BQ9Y463 629 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 C2orf16Q68DN1 1984 aa9.61□□□□□ -0.87
VRK1-206ENST00000557222 DOCK8Q8NF50 2099 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 OTOGLQ3ZCN5 2332 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 DMXL1Q9Y485 3027 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 ANHXE9PGG2 379 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 INO80B-WBP1J3KQ70 363 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 C2CD2LO14523 706 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 PI15O43692 258 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 PFKFB2O60825 505 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 N4BP1O75113 896 aaKnown RBP9.6□□□□□ -0.87
VRK1-206ENST00000557222 POU2F2P09086 479 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 LAMP2P13473 410 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 ARF4P18085 180 aaPredicted RBP9.6□□□□□ -0.87
VRK1-206ENST00000557222 GBP2P32456 591 aaPredicted RBP9.6□□□□□ -0.87
VRK1-206ENST00000557222 MLH1P40692 756 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 SCNN1GP51170 649 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 MBTD1Q05BQ5 628 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 SCRN1Q12765 414 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 GRIK3Q13003 919 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 CTTNQ14247 550 aaKnown RBP9.6□□□□□ -0.87
VRK1-206ENST00000557222 ANKRD1Q15327 319 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 MAP7D1Q3KQU3 841 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 NCAPH2Q6IBW4 605 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 PDXDC1Q6P996 788 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 SLC27A1Q6PCB7 646 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 PIK3AP1Q6ZUJ8 805 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 TAS1R3Q7RTX0 852 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 TPH2Q8IWU9 490 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 PLPP7Q8NBV4 271 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 GSTCDQ8NEC7 633 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 PRIMPOLQ96LW4 560 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 EIF2AK1Q9BQI3 630 aaKnown RBP9.6□□□□□ -0.87
VRK1-206ENST00000557222 BRMS1Q9HCU9 246 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 SLC2A4RGQ9NR83 387 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 MIOSQ9NXC5 875 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 ADAM28Q9UKQ2 775 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 CEP250Q9BV73 2442 aa9.6□□□□□ -0.87
VRK1-206ENST00000557222 ZBTB39O15060 712 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 TGM5O43548 720 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.87
VRK1-206ENST00000557222 HNRNPA1P09651 372 aaKnown RBP eCLIP9.59□□□□□ -0.87
VRK1-206ENST00000557222 HOXA9P31269 272 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 KRT2P35908 639 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 STK3Q13188 491 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 CAPSQ13938 189 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 FAM187BQ17R55 369 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 FUT10Q6P4F1 479 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 RIPOR1Q6ZS17 1223 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 ADSSL1Q8N142 457 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 FEZF2Q8TBJ5 459 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 ZNF837Q96EG3 531 aaPredicted RBP9.59□□□□□ -0.87
VRK1-206ENST00000557222 CPB2Q96IY4 423 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 MYADMQ96S97 322 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 GPR62Q9BZJ7 368 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 PIDD1Q9HB75 910 aa9.59□□□□□ -0.87
VRK1-206ENST00000557222 PRMT7Q9NVM4 692 aaPredicted RBP9.59□□□□□ -0.87
VRK1-206ENST00000557222 SF3B1O75533 1304 aaKnown RBP eCLIP9.58□□□□□ -0.883e-6■■■■■ 137.9
VRK1-206ENST00000557222 KRBA1A5PL33 1030 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 NARSO43776 548 aaKnown RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 TADA2AO75478 443 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 RFPL2O75678 378 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 LMNAP02545 664 aaKnown RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 GLRA2P23416 452 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 RARRES1P49788 294 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 ANAPC15P60006 121 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 CYP4A11Q02928 519 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 ELAVL2Q12926 359 aaKnown RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 TUSC3Q13454 348 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 HTR4Q13639 388 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 HSP90AA2PQ14568 343 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms