RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 MCM8Q9UJA3 840 aa5.65□□□□□ -1.5
ATXN3-246ENST00000557030 RRP7AQ9Y3A4 280 aaKnown RBP5.65□□□□□ -1.5
ATXN3-246ENST00000557030 METP08581 1390 aa5.65□□□□□ -1.51
ATXN3-246ENST00000557030 C3P01024 1663 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 GRXCR1A8MXD5 290 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 PEX11BO96011 259 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 HSP90AA1P07900 732 aaKnown RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 TPM2P07951 284 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 IGBP1P78318 339 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 CCT2P78371 535 aaKnown RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 KLF10Q13118 480 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 TOB2Q14106 344 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 LSM12Q3MHD2 195 aaKnown RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 ALDH1L2Q3SY69 923 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 RNF219Q5W0B1 726 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 LMBR1LQ6UX01 489 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 ATF7IPQ6VMQ6 1270 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 RPUSD2Q8IZ73 545 aaKnown RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 LILRA3Q8N6C8 439 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 AMER2Q8N7J2 671 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 OR14C36Q8NHC7 312 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 ANP32BQ92688 251 aaKnown RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 TRIM44Q96DX7 344 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 AHCYL2Q96HN2 611 aaKnown RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 GRPEL1Q9HAV7 217 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 SMC4Q9NTJ3 1288 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 TERF2IPQ9NYB0 399 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 ATP8A1Q9Y2Q0 1164 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 HS3ST3A1Q9Y663 406 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 PNPLA6Q8IY17 1366 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 TNRQ92752 1358 aa5.64□□□□□ -1.51
ATXN3-246ENST00000557030 SETD1BQ9UPS6 1966 aaKnown RBP5.64□□□□□ -1.51
ATXN3-246ENST00000557030 NRP1O14786 923 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 HOXA3O43365 443 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 NRP2O60462 931 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 TMEM127O75204 238 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 HSP90AB1P08238 724 aaKnown RBP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 U2AF1L5P0DN76 240 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 ENPP1P22413 925 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 DDIT3P35638 169 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 MAN2A2P49641 1150 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 NPEPPSP55786 919 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 WNT3AP56704 352 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 NRG3P56975 720 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 ANAPC15P60006 121 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 CDK17Q00537 523 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 U2AF1Q01081 240 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 NUCB1Q02818 461 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 FSCN1Q16658 493 aaKnown RBP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 BMP2KLQ5H9B9 411 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 METTL24Q5JXM2 366 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 APBB1IPQ7Z5R6 666 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 ITPRIPQ8IWB1 547 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 ZFPM1Q8IX07 1006 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 ELOA2Q8IYF1 753 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 GCC1Q96CN9 775 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 ACAP3Q96P50 834 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 ORAI2Q96SN7 254 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 MNTQ99583 582 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 PDCD2LQ9BRP1 358 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 DPP7Q9UHL4 492 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 CDY2AQ9Y6F7 541 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 IBTKQ9P2D0 1353 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 TECPR2O15040 1411 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 CPSF1Q10570 1443 aaKnown RBP5.63□□□□□ -1.51
ATXN3-246ENST00000557030 ATP7BP35670 1465 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 CDC42BPGQ6DT37 1551 aa5.63□□□□□ -1.51
ATXN3-246ENST00000557030 KNDC1Q76NI1 1749 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 KIF20BQ96Q89 1820 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 TRIM27P14373 513 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 TMPOP42166 694 aaKnown RBP5.62□□□□□ -1.51
ATXN3-246ENST00000557030 EVA1CP58658 441 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 MEF2AQ02078 507 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-246ENST00000557030 CALD1Q05682 793 aaKnown RBP5.62□□□□□ -1.51
ATXN3-246ENST00000557030 CCDC173Q0VFZ6 552 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 MRPL49Q13405 166 aaKnown RBP5.62□□□□□ -1.51
ATXN3-246ENST00000557030 TUBA3CQ13748 450 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 UBE3CQ15386 1083 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 C19orf54Q5BKX5 351 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 DCAF17Q5H9S7 520 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-246ENST00000557030 TOR2AQ5JU69 321 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 TUBA3EQ6PEY2 450 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 CLEC17AQ6ZS10 378 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 GLB1L2Q8IW92 636 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 LMBR1Q8WVP7 490 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 ZNF341Q9BYN7 854 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 SLC5A4Q9NY91 659 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 TRPS1Q9UHF7 1281 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 ING1Q9UK53 422 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-246ENST00000557030 TNNQ9UQP3 1299 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 FAM135BQ49AJ0 1406 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 CPS1P31327 1500 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 UBR1Q8IWV7 1749 aa5.62□□□□□ -1.51
ATXN3-246ENST00000557030 PRAMEF4O60810 478 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 MFAP3LO75121 409 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 IPO13O94829 963 aaKnown RBP5.61□□□□□ -1.51
ATXN3-246ENST00000557030 ZNF202O95125 648 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 LTA4HP09960 611 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms