RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TFAMQ00059 246 aaKnown RBP18.95■□□□□ 0.62
SHMT2-225ENST00000556798 CYP24A1Q07973 514 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 CCDC85BQ15834 202 aaPredicted RBP18.95■□□□□ 0.62
SHMT2-225ENST00000556798 SPATA1Q5VX52 437 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 CENPPQ6IPU0 288 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 FUT10Q6P4F1 479 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 CD300LGQ6UXG3 332 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 TRIML1Q8N9V2 468 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 BEST2Q8NFU1 509 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 MICAL1Q8TDZ2 1067 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 AUTS2Q8WXX7 1259 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 PPM1EQ8WY54 764 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 CCDC127Q96BQ5 260 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 EEF2KMTQ96G04 330 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 B3GALT6Q96L58 329 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 GPR62Q9BZJ7 368 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 LMCD1Q9NZU5 365 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 CTNND2Q9UQB3 1225 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 DERAQ9Y315 318 aa18.95■□□□□ 0.62
SHMT2-225ENST00000556798 I3L4J1 428 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 PPEF2O14830 753 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 FSCN2O14926 492 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 CYP3A5P20815 502 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 CA8P35219 290 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 NFIL3Q16649 462 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 ANKRD40Q6AI12 368 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 DCLRE1AQ6PJP8 1040 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 TAS1R1Q7RTX1 841 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 TMC7Q7Z402 723 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 DDX27Q96GQ7 796 aaKnown RBP18.94■□□□□ 0.62
SHMT2-225ENST00000556798 DHTKD1Q96HY7 919 aaPredicted RBP18.94■□□□□ 0.62
SHMT2-225ENST00000556798 TSPAN18Q96SJ8 248 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 TSG101Q99816 390 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 ZBP1Q9H171 429 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 STXBP5LQ9Y2K9 1186 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 PLXNA3P51805 1871 aa18.94■□□□□ 0.62
SHMT2-225ENST00000556798 TMEM189-UBE2V1I3L0A0 370 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 EFEMP2O95967 443 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 SOD2P04179 222 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 DLATP10515 647 aaKnown RBP18.93■□□□□ 0.62
SHMT2-225ENST00000556798 CCNE1P24864 410 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 LRPAP1P30533 357 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 RPL9P32969 192 aaKnown RBP18.93■□□□□ 0.62
SHMT2-225ENST00000556798 BRCC3P46736 316 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 ADAM9Q13443 819 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 MYBPC2Q14324 1141 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 PSMD6Q15008 389 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 EDRF1Q3B7T1 1238 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 TIGD5Q53EQ6 642 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 TCEAL5Q5H9L2 206 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 ADGRD2Q7Z7M1 963 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 RNF168Q8IYW5 571 aaPredicted RBP18.93■□□□□ 0.62
SHMT2-225ENST00000556798 PLEKHO2Q8TD55 490 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 TMEM174Q8WUU8 243 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 NELFBQ8WX92 580 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 MFSD14AQ96MC6 490 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 POP1Q99575 1024 aaKnown RBP18.93■□□□□ 0.62
SHMT2-225ENST00000556798 HERC2P3Q9BVR0 1158 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 MTMR12Q9C0I1 747 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 GZF1Q9H116 711 aaPredicted RBP18.93■□□□□ 0.62
SHMT2-225ENST00000556798 NSUN3Q9H649 340 aaKnown RBP18.93■□□□□ 0.62
SHMT2-225ENST00000556798 DPP3Q9NY33 737 aa18.93■□□□□ 0.62
SHMT2-225ENST00000556798 SF3B1O75533 1304 aaKnown RBP eCLIP18.93■□□□□ 0.62
SHMT2-225ENST00000556798 HIDE1A8MVS5 230 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 C2CD2LO14523 706 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 AKAP3O75969 853 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 CTSAP10619 480 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 RPL13P26373 211 aaKnown RBP18.92■□□□□ 0.62
SHMT2-225ENST00000556798 PPP1R2P41236 205 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 STX17P56962 302 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 SMC1AQ14683 1233 aaKnown RBP18.92■□□□□ 0.62
SHMT2-225ENST00000556798 SURF1Q15526 300 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 C9orf57Q5W0N0 161 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 SCARA3Q6AZY7 606 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 NT5DC4Q86YG4 428 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 OR5B17Q8NGF7 314 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 MAFAQ8NHW3 353 aaPredicted RBP18.92■□□□□ 0.62
SHMT2-225ENST00000556798 CGRRF1Q99675 332 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 INTS13Q9NVM9 706 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 TMEM63CQ9P1W3 806 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 FRMD4BQ9Y2L6 1034 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 NUB1Q9Y5A7 615 aa18.92■□□□□ 0.62
SHMT2-225ENST00000556798 COL6A3P12111 3177 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 BRWD1Q9NSI6 2320 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.91■□□□□ 0.62
SHMT2-225ENST00000556798 TMEM191BP0C7N4 346 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 TNNI1P19237 187 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 GLUD2P49448 558 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 LRRC63Q05C16 580 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 PAK1Q13153 545 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 DPCR1Q3MIW9 517 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 CCDC183Q5T5S1 534 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 FAM171A1Q5VUB5 890 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 RBM43Q6ZSC3 357 aaKnown RBP18.91■□□□□ 0.62
SHMT2-225ENST00000556798 WDR49Q8IV35 697 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 C1orf127Q8N9H9 656 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 FNBP1Q96RU3 617 aa18.91■□□□□ 0.62
SHMT2-225ENST00000556798 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.91■□□□□ 0.62
SHMT2-225ENST00000556798 C2orf71A6NGG8 1288 aa18.9■□□□□ 0.62
SHMT2-225ENST00000556798 CETN3O15182 167 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms