RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 PRSS55Q6UWB4 352 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-220ENST00000556486 ZNF511Q8NB15 262 aa11.13□□□□□ -0.63
SCFD1-220ENST00000556486 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
SCFD1-220ENST00000556486 HAS1Q92839 578 aa11.13□□□□□ -0.63
SCFD1-220ENST00000556486 COL26A1Q96A83 441 aa11.13□□□□□ -0.63
SCFD1-220ENST00000556486 PGBD4Q96DM1 585 aa11.13□□□□□ -0.63
SCFD1-220ENST00000556486 APOL6Q9BWW8 343 aa11.13□□□□□ -0.63
SCFD1-220ENST00000556486 MINDY3Q9H8M7 445 aa11.13□□□□□ -0.63
SCFD1-220ENST00000556486 KANSL3Q9P2N6 904 aa11.13□□□□□ -0.63
SCFD1-220ENST00000556486 WRAP73Q9P2S5 460 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-220ENST00000556486 POLIQ9UNA4 740 aa11.13□□□□□ -0.63
SCFD1-220ENST00000556486 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-220ENST00000556486 CCDC194A0A1B0GVG4 234 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 CCL16O15467 120 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 ASAP2O43150 1006 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 PAPLNO95428 1278 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 EFEMP2O95967 443 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 MLH1P40692 756 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 SCNN1GP51170 649 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 POU5F1BQ06416 359 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 SCRN1Q12765 414 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 EPHA7Q15375 998 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 ZNF528Q3MIS6 628 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 SLC44A4Q53GD3 710 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 UBXN11Q5T124 520 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 CNNM3Q8NE01 707 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 PRPF31Q8WWY3 499 aaKnown RBP11.12□□□□□ -0.63
SCFD1-220ENST00000556486 PSPC1Q8WXF1 523 aaKnown RBP11.12□□□□□ -0.63
SCFD1-220ENST00000556486 ING5Q8WYH8 240 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 SECISBP2LQ93073 1101 aaKnown RBP11.12□□□□□ -0.63
SCFD1-220ENST00000556486 SHDQ96IW2 340 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 TMEM175Q9BSA9 504 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 RTKNQ9BST9 563 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 C1QTNF2Q9BXJ5 285 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 RHOBTB2Q9BYZ6 727 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 PRKD2Q9BZL6 878 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 LTB4R2Q9NPC1 389 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
SCFD1-220ENST00000556486 MIOSQ9NXC5 875 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.12□□□□□ -0.63
SCFD1-220ENST00000556486 FBXO4Q9UKT5 387 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 HES2Q9Y543 173 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 PCDHGA2Q9Y5H1 932 aa11.12□□□□□ -0.63
SCFD1-220ENST00000556486 PRR5-ARHGAP8B1AHC4 643 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 GDF9O60383 454 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 PFKFB2O60825 505 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 LYPLA2O95372 231 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 C1RP00736 705 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 SRGAP2CP0DJJ0 459 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 XBP1P17861 261 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
SCFD1-220ENST00000556486 TARSP26639 723 aaKnown RBP11.11□□□□□ -0.63
SCFD1-220ENST00000556486 YWHABP31946 246 aaKnown RBP11.11□□□□□ -0.63
SCFD1-220ENST00000556486 NPEPPSP55786 919 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 ARHGAP8P85298 464 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 LAMTOR4Q0VGL1 99 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 COL9A2Q14055 689 aaPredicted RBP11.11□□□□□ -0.63
SCFD1-220ENST00000556486 NAA30Q147X3 362 aaPredicted RBP11.11□□□□□ -0.63
SCFD1-220ENST00000556486 ELMSAN1Q6PJG2 1045 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 PRR23BQ6ZRT6 265 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 TPRG1Q6ZUI0 275 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 COLGALT2Q8IYK4 626 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 SLFN12Q8IYM2 578 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 RNF168Q8IYW5 571 aaPredicted RBP11.11□□□□□ -0.63
SCFD1-220ENST00000556486 ZBTB44Q8NCP5 570 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 SMG8Q8ND04 991 aaKnown RBP11.11□□□□□ -0.63
SCFD1-220ENST00000556486 ITFG1Q8TB96 612 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 HASPINQ8TF76 798 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 TCP11Q8WWU5 503 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 NXPE3Q969Y0 559 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 CCDC51Q96ER9 411 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 CEP170P1Q96L14 293 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 DRC1Q96MC2 740 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 GAD1Q99259 594 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 LXNQ9BS40 222 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
SCFD1-220ENST00000556486 NFKBIZQ9BYH8 718 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 GPR62Q9BZJ7 368 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 EPC1Q9H2F5 836 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 ZSWIM4Q9H7M6 989 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 RXFP1Q9HBX9 757 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 UBN1Q9NPG3 1134 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 PDRG1Q9NUG6 133 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 HCFC1R1Q9NWW0 138 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 ZSCAN32Q9NX65 697 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 GMEB2Q9UKD1 530 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 KCNJ14Q9UNX9 436 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 ZMYM2Q9UBW7 1377 aa11.11□□□□□ -0.63
SCFD1-220ENST00000556486 RALGAPA1Q6GYQ0 2036 aa11.1□□□□□ -0.63
SCFD1-220ENST00000556486 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
SCFD1-220ENST00000556486 SDHBP21912 280 aa11.1□□□□□ -0.63
SCFD1-220ENST00000556486 AXLP30530 894 aa11.1□□□□□ -0.63
SCFD1-220ENST00000556486 ANAPC15P60006 121 aa11.1□□□□□ -0.63
SCFD1-220ENST00000556486 DSG1Q02413 1049 aa11.1□□□□□ -0.63
SCFD1-220ENST00000556486 MTAPQ13126 283 aa11.1□□□□□ -0.63
SCFD1-220ENST00000556486 MXD4Q14582 209 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-220ENST00000556486 EMC2Q15006 297 aa11.1□□□□□ -0.63
SCFD1-220ENST00000556486 TSNAXIP1Q2TAA8 658 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms