RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 GPR101Q96P66 508 aaPredicted RBP5.95□□□□□ -1.46
SRP54-211ENST00000556445 AMNQ9BXJ7 453 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 C22orf23Q9BZE7 217 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 TRIM8Q9BZR9 551 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 INCENPQ9NQS7 918 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 KCNH7Q9NS40 1196 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 TMOD3Q9NYL9 352 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 FBXO2Q9UK22 296 aaPredicted RBP5.95□□□□□ -1.46
SRP54-211ENST00000556445 NOL7Q9UMY1 257 aaKnown RBP5.95□□□□□ -1.46
SRP54-211ENST00000556445 ZDHHC9Q9Y397 364 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 SPEF1Q9Y4P9 236 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 UBR2Q8IWV8 1755 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 LRP6O75581 1613 aa5.95□□□□□ -1.46
SRP54-211ENST00000556445 SLC12A8A0AV02 714 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 PRSS47A8MTI9 375 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 GABRDO14764 452 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 ERC2O15083 957 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 HIP1RO75146 1068 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 SURF6O75683 361 aaKnown RBP5.94□□□□□ -1.46
SRP54-211ENST00000556445 REC8O95072 547 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 STARD3NLO95772 234 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 APPP05067 770 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 ZBTB48P10074 688 aaPredicted RBP5.94□□□□□ -1.46
SRP54-211ENST00000556445 PDE1AP54750 535 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 PPP2CBP62714 309 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 PPP2CAP67775 309 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 IL13RA1P78552 427 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 AIMP1Q12904 312 aaKnown RBP5.94□□□□□ -1.46
SRP54-211ENST00000556445 STILQ15468 1287 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 ZCCHC8Q6NZY4 707 aaKnown RBP5.94□□□□□ -1.46
SRP54-211ENST00000556445 CC2D1AQ6P1N0 951 aaPredicted RBP5.94□□□□□ -1.46
SRP54-211ENST00000556445 MMS22LQ6ZRQ5 1243 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 COPS6Q7L5N1 327 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 OTOP1Q7RTM1 612 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 LIMS2Q7Z4I7 341 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 PPP1R42Q7Z4L9 355 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 KRT77Q7Z794 578 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 LRRTM3Q86VH5 581 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 ZNF354CQ86Y25 554 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 ASB15Q8WXK1 588 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 PUS7LQ9H0K6 701 aaKnown RBP5.94□□□□□ -1.46
SRP54-211ENST00000556445 PLCB1Q9NQ66 1216 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 GALNT8Q9NY28 637 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 STAP2Q9UGK3 403 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 FRMD4BQ9Y2L6 1034 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 RABGAP1Q9Y3P9 1069 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 USP16Q9Y5T5 823 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 PAPPAQ13219 1627 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 C5P01031 1676 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 ZNF536O15090 1300 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 NWD2Q9ULI1 1742 aa5.94□□□□□ -1.46
SRP54-211ENST00000556445 DISP2A7MBM2 1401 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 TNS2Q63HR2 1409 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 PNMA6EA0A0J9YXQ4 647 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 B4GALT4O60513 344 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 NBNO60934 754 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 CNOT4O95628 575 aaKnown RBP5.93□□□□□ -1.46
SRP54-211ENST00000556445 MYL6BP14649 208 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 MX1P20591 662 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 POLD1P28340 1107 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 SDHAP31040 664 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 MAGEA10P43363 369 aaPredicted RBP5.93□□□□□ -1.46
SRP54-211ENST00000556445 GPSM2P81274 684 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 G3BP1Q13283 466 aaKnown RBP eCLIP5.93□□□□□ -1.46
SRP54-211ENST00000556445 TOP3AQ13472 1001 aaPredicted RBP5.93□□□□□ -1.46
SRP54-211ENST00000556445 ZNF460Q14592 562 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 PUM3Q15397 648 aaKnown RBP5.93□□□□□ -1.46
SRP54-211ENST00000556445 CATSPEREQ5SY80 951 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 PDXDC1Q6P996 788 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 LRSAM1Q6UWE0 723 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 DPP8Q6V1X1 898 aaPredicted RBP5.93□□□□□ -1.46
SRP54-211ENST00000556445 ARHGEF18Q6ZSZ5 1173 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 GPR155Q7Z3F1 870 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 RALYLQ86SE5 291 aaKnown RBP5.93□□□□□ -1.46
SRP54-211ENST00000556445 CLASRPQ8N2M8 674 aaKnown RBP5.93□□□□□ -1.46
SRP54-211ENST00000556445 TTC30BQ8N4P2 665 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 C2orf69Q8N8R5 385 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 VPS37AQ8NEZ2 397 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 GJA10Q969M2 543 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 SCLT1Q96NL6 688 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 SAMD11Q96NU1 681 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 PTPN18Q99952 460 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 MEGF9Q9H1U4 602 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 INTS7Q9NVH2 962 aaKnown RBP5.93□□□□□ -1.46
SRP54-211ENST00000556445 PGAP2Q9UHJ9 254 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 TRHDEQ9UKU6 1024 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 EXOC6BQ9Y2D4 811 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 PTPN22Q9Y2R2 807 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 TNPO3Q9Y5L0 923 aaKnown RBP5.93□□□□□ -1.46
SRP54-211ENST00000556445 SLC4A7Q9Y6M7 1214 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 SHANK3Q9BYB0 1731 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 TNKSO95271 1327 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 TTC41PQ6P2S7 1318 aa5.93□□□□□ -1.46
SRP54-211ENST00000556445 COL16A1Q07092 1604 aaPredicted RBP5.92□□□□□ -1.46
SRP54-211ENST00000556445 BICDL2A1A5D9 508 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 B4E1Z4 1266 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 M0R2C6 588 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 FOXP2O15409 715 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 CUTAO60888 179 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms