RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 DNAJB3Q8WWF6 145 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 MSLNLQ96KJ4 702 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 RSRP1Q9BUV0 290 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 TNKS2Q9H2K2 1166 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 ERAP1Q9NZ08 941 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 TJP2Q9UDY2 1190 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 MAPK8IP1Q9UQF2 711 aa10.24□□□□□ -0.77
GTF2A1-204ENST00000556268 LAMA4Q16363 1823 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 RRN3P2A6NIE6 340 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 CILPO75339 1184 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 F13A1P00488 732 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 CST3P01034 146 aaPredicted RBP10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 MMP1P03956 469 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 GHRP10912 638 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 CTNNB1P35222 781 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 NHLH1Q02575 133 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 PRKCQQ04759 706 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 PPFIA1Q13136 1202 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 SMAD4Q13485 552 aaKnown RBP10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 BTG3Q14201 252 aaPredicted RBP10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 SART3Q15020 963 aaKnown RBP10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 TTC22Q5TAA0 569 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 TSHZ1Q6ZSZ6 1077 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 SPACA3Q8IXA5 215 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 SRBD1Q8N5C6 995 aaKnown RBP10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 EXOC6Q8TAG9 804 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 SMARCC2Q8TAQ2 1214 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 RUFY2Q8WXA3 655 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 LINC01599Q8WXQ3 324 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 CUL5Q93034 780 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 HRASLS5Q96KN8 279 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 PCYT2Q99447 389 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 DPH2Q9BQC3 489 aaPredicted RBP10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 KRTAP4-8Q9BYQ9 185 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 SMARCAD1Q9H4L7 1026 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 PSTPIP2Q9H939 334 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 LY9Q9HBG7 655 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 JADE2Q9NQC1 790 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 ADGRA3Q8IWK6 1321 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 C5orf42Q9H799 3197 aa10.23□□□□□ -0.77
GTF2A1-204ENST00000556268 WDFY4Q6ZS81 3184 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 FAM221AA4D161 298 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 SGSM2O43147 1006 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 BPNT1O95861 308 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 INSRRP14616 1297 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 DNAJB1P25685 340 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 KIF5BP33176 963 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 GTF2F1P35269 517 aaKnown RBP eCLIP10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 LIFRP42702 1097 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 MRE11P49959 708 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 GNAQP50148 359 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 MRPS6P82932 125 aaKnown RBP10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 FAM160A1Q05DH4 1040 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 PWP1Q13610 501 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 PLPPR4Q7Z2D5 763 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 ERMP1Q7Z2K6 904 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 RALYLQ86SE5 291 aaKnown RBP10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 MRPL41Q8IXM3 137 aaKnown RBP10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 CMTR2Q8IYT2 770 aaKnown RBP10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 ZNF654Q8IZM8 581 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 NME8Q8N427 588 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 GATAD2BQ8WXI9 593 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 PIBF1Q8WXW3 757 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 EDAQ92838 391 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 UIMC1Q96RL1 719 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 FTHL17Q9BXU8 183 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 ALG13Q9NP73 1137 aaKnown RBP10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 KBTBD4Q9NVX7 518 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 CLEC1BQ9P126 229 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 TUBE1Q9UJT0 475 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 VAV3Q9UKW4 847 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 PCDHA2Q9Y5H9 948 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 CORINQ9Y5Q5 1042 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 CDY2AQ9Y6F7 541 aa10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 MRPL42Q9Y6G3 142 aaKnown RBP10.22□□□□□ -0.77
GTF2A1-204ENST00000556268 KAT6AQ92794 2004 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 ZNF318Q5VUA4 2279 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 LOC730098B7Z3J9 87 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 LINC01565O15544 149 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 TBX10O75333 385 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 DDAH1O94760 285 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 ITGB1P05556 798 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 CD8BP10966 210 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 ZNF16P17020 682 aaPredicted RBP10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 CD52P31358 61 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 SP4Q02446 784 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 COASYQ13057 564 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 CBX2Q14781 532 aaPredicted RBP10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 LETMD1Q6P1Q0 360 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 EP400NLQ6ZTU2 488 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 CBLL1Q75N03 491 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 TEX2Q8IWB9 1127 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 EFHBQ8N7U6 833 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 CTCFLQ8NI51 663 aaPredicted RBP10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 RIN3Q8TB24 985 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 GLG1Q92896 1179 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 TMEM87BQ96K49 555 aa10.21□□□□□ -0.77
GTF2A1-204ENST00000556268 TMX1Q9H3N1 280 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms