RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 KCNG1Q9UIX4 513 aa20.6■□□□□ 0.89
CDKN3-209ENST00000556102 SIT1Q9Y3P8 196 aa20.6■□□□□ 0.89
CDKN3-209ENST00000556102 GVINP1Q7Z2Y8 2422 aa20.59■□□□□ 0.89
CDKN3-209ENST00000556102 DCNP07585 359 aaKnown RBP20.59■□□□□ 0.89
CDKN3-209ENST00000556102 HARSP12081 509 aaKnown RBP20.59■□□□□ 0.89
CDKN3-209ENST00000556102 RPL9P32969 192 aaKnown RBP20.59■□□□□ 0.89
CDKN3-209ENST00000556102 STARD6P59095 220 aa20.59■□□□□ 0.89
CDKN3-209ENST00000556102 STRN3Q13033 797 aa20.59■□□□□ 0.89
CDKN3-209ENST00000556102 RABEP1Q15276 862 aa20.59■□□□□ 0.89
CDKN3-209ENST00000556102 SYT2Q8N9I0 419 aaPredicted RBP20.59■□□□□ 0.89
CDKN3-209ENST00000556102 ZNF461Q8TAF7 563 aa20.59■□□□□ 0.89
CDKN3-209ENST00000556102 ZBTB45Q96K62 511 aaPredicted RBP20.59■□□□□ 0.89
CDKN3-209ENST00000556102 PNMA5Q96PV4 448 aa20.59■□□□□ 0.89
CDKN3-209ENST00000556102 DLGAP2Q9P1A6 1054 aa20.59■□□□□ 0.89
CDKN3-209ENST00000556102 MRPS23Q9Y3D9 190 aaKnown RBP20.59■□□□□ 0.89
CDKN3-209ENST00000556102 NUB1Q9Y5A7 615 aa20.59■□□□□ 0.89
CDKN3-209ENST00000556102 CACNA1IQ9P0X4 2223 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 ARHGEF37A1IGU5 675 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 H7C4K7 107 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 TBC1D4O60343 1298 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 TOM1L1O75674 476 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 ABLIM3O94929 683 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 PLS3P13797 630 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 SMTNP53814 917 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 RAD51AP2Q09MP3 1159 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 NOLC1Q14978 699 aaKnown RBP eCLIP20.58■□□□□ 0.89
CDKN3-209ENST00000556102 SPECC1Q5M775 1068 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 TMEM161BQ8NDZ6 487 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 PJA1Q8NG27 643 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 C18orf25Q96B23 403 aaPredicted RBP20.58■□□□□ 0.89
CDKN3-209ENST00000556102 AVENQ9NQS1 362 aaPredicted RBP20.58■□□□□ 0.89
CDKN3-209ENST00000556102 KCND2Q9NZV8 630 aa20.58■□□□□ 0.89
CDKN3-209ENST00000556102 FANCMQ8IYD8 2048 aa20.58■□□□□ 0.88
CDKN3-209ENST00000556102 WDR27A2RRH5 827 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 MEFVO15553 781 aaPredicted RBP20.57■□□□□ 0.88
CDKN3-209ENST00000556102 LRG1P02750 347 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 RHOP08100 348 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 ELF1P32519 619 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 MRPL58Q14197 206 aaKnown RBP20.57■□□□□ 0.88
CDKN3-209ENST00000556102 ZPBP2Q6X784 338 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 ING5Q8WYH8 240 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 CDK5RAP3Q96JB5 506 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 KXD1Q9BQD3 176 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 FOXQ1Q9C009 403 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 ANKFY1Q9P2R3 1169 aa20.57■□□□□ 0.88
CDKN3-209ENST00000556102 VWA3AA6NCI4 1184 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 PRRG1O14668 218 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 PLA2G4BP0C869 781 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 MAPTP10636 758 aaKnown RBP20.56■□□□□ 0.88
CDKN3-209ENST00000556102 ATF2P15336 505 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 PTPN2P17706 415 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 SLC12A3P55017 1021 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 ARPP19P56211 112 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 PFKPQ01813 784 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 PRKCQQ04759 706 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 SNW1Q13573 536 aaKnown RBP20.56■□□□□ 0.88
CDKN3-209ENST00000556102 MLF2Q15773 248 aaPredicted RBP20.56■□□□□ 0.88
CDKN3-209ENST00000556102 SLC5A9Q2M3M2 681 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 SLC10A6Q3KNW5 377 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 ARL6IP4Q66PJ3 421 aaKnown RBP20.56■□□□□ 0.88
CDKN3-209ENST00000556102 TCEAL8Q8IYN2 117 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 ADSSL1Q8N142 457 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 SUSD3Q96L08 255 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 SEMA4AQ9H3S1 761 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 GDE1Q9NZC3 331 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 FBXL5Q9UKA1 691 aa20.56■□□□□ 0.88
CDKN3-209ENST00000556102 KANSL1LA0AUZ9 987 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 H3BQV1 296 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 CLDN3O15551 220 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 MCM4P33991 863 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 MCL1Q07820 350 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 TMEM119Q4V9L6 283 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 SEZ6Q53EL9 994 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 SLC44A4Q53GD3 710 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 TPGS2Q68CL5 300 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 ZNF280DQ6N043 979 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 C1orf210Q8IVY1 113 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 MCRS1Q96EZ8 462 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 TMX3Q96JJ7 454 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 PLIN2Q99541 437 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 DDX23Q9BUQ8 820 aaKnown RBP20.55■□□□□ 0.88
CDKN3-209ENST00000556102 CYP4F11Q9HBI6 524 aa20.55■□□□□ 0.88
CDKN3-209ENST00000556102 EP300Q09472 2414 aaPredicted RBP20.55■□□□□ 0.88
CDKN3-209ENST00000556102 H0YCG3 227 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 ECI2O75521 394 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 GLULP15104 373 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 GJB2P29033 226 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 CTXN3Q4LDR2 81 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 APPL2Q8NEU8 664 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 TBC1D32Q96NH3 1257 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 LARSQ9P2J5 1176 aaKnown RBP20.54■□□□□ 0.88
CDKN3-209ENST00000556102 TUBGCP4Q9UGJ1 667 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 INSL5Q9Y5Q6 135 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 COL4A3Q01955 1670 aa20.54■□□□□ 0.88
CDKN3-209ENST00000556102 SLC26A4O43511 780 aa20.53■□□□□ 0.88
CDKN3-209ENST00000556102 LRRN2O75325 713 aa20.53■□□□□ 0.88
CDKN3-209ENST00000556102 SEC24AO95486 1093 aa20.53■□□□□ 0.88
CDKN3-209ENST00000556102 CLTAP09496 248 aa20.53■□□□□ 0.88
CDKN3-209ENST00000556102 CXCL8P10145 99 aa20.53■□□□□ 0.88
CDKN3-209ENST00000556102 CEBPBP17676 345 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms