RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 STK39Q9UEW8 545 aa8.74□□□□□ -1.01
PSEN1-215ENST00000556011 SWAP70Q9UH65 585 aa8.74□□□□□ -1.01
PSEN1-215ENST00000556011 FBXW11Q9UKB1 542 aa8.74□□□□□ -1.01
PSEN1-215ENST00000556011 ATXN7L1Q9ULK2 861 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-215ENST00000556011 ISY1Q9ULR0 285 aaKnown RBP8.74□□□□□ -1.01
PSEN1-215ENST00000556011 WDR27A2RRH5 827 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 ENC1O14682 589 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 RHOP08100 348 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 LSSP48449 732 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 BNC1Q01954 994 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 CACTIN-AS1Q8N1I8 211 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 TMEM40Q8WWA1 233 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 CHMP4CQ96CF2 233 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 TCEAL4Q96EI5 215 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.73□□□□□ -1.01
PSEN1-215ENST00000556011 HERC2P3Q9BVR0 1158 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 MCM9Q9NXL9 1143 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 GINS2Q9Y248 185 aa8.73□□□□□ -1.01
PSEN1-215ENST00000556011 MBLAC1A4D2B0 266 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-215ENST00000556011 MAOBP27338 520 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 ACADVLP49748 655 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 POLE2P56282 527 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 SP2Q02086 613 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 IKQ13123 557 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-215ENST00000556011 TRIML1Q8N9V2 468 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 HTR3CQ8WXA8 447 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 B3GALT6Q96L58 329 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 HSPA12BQ96MM6 686 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 MBOAT7Q96N66 472 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 FAM124BQ9H5Z6 455 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-215ENST00000556011 POLR1BQ9H9Y6 1135 aa8.72□□□□□ -1.01
PSEN1-215ENST00000556011 F6X3S4 739 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 HOXA9P31269 272 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 TMPOP42166 694 aaKnown RBP8.71□□□□□ -1.02
PSEN1-215ENST00000556011 STAT2P52630 851 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 KRT76Q01546 638 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 FLIIQ13045 1269 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 PPFIA1Q13136 1202 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 MRPL49Q13405 166 aaKnown RBP8.71□□□□□ -1.02
PSEN1-215ENST00000556011 STXBP2Q15833 593 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 GRIK4Q16099 956 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 TTC39AQ5SRH9 613 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 UTP14CQ5TAP6 766 aaKnown RBP8.71□□□□□ -1.02
PSEN1-215ENST00000556011 RPAP2Q8IXW5 612 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-215ENST00000556011 SMARCC2Q8TAQ2 1214 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 USP33Q8TEY7 942 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 CLEC4DQ8WXI8 215 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 CHFRQ96EP1 664 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 TBC1D13Q9NVG8 400 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.71□□□□□ -1.02
PSEN1-215ENST00000556011 GABBR1Q9UBS5 961 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 SUSD2Q9UGT4 822 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 FPGT-TNNI3KV9GXZ4 949 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 KDM3AQ9Y4C1 1321 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 TENM1Q9UKZ4 2725 aa8.71□□□□□ -1.02
PSEN1-215ENST00000556011 TRDMT1O14717 391 aaKnown RBP8.7□□□□□ -1.02
PSEN1-215ENST00000556011 USP12O75317 370 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 ICAM1P05362 532 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 GNSP15586 552 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 CYP7A1P22680 504 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 U2AF2P26368 475 aaKnown RBP eCLIP8.7□□□□□ -1.02
PSEN1-215ENST00000556011 PPP2R2AP63151 447 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 IGBP1P78318 339 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 INSM1Q01101 510 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-215ENST00000556011 DSG1Q02413 1049 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 FCHO2Q0JRZ9 810 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 PSMD2Q13200 908 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 GPIHBP1Q8IV16 184 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 SLC7A14Q8TBB6 771 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 EZH1Q92800 747 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-215ENST00000556011 XAGE2Q96GT9 111 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 HEXIM2Q96MH2 286 aaKnown RBP8.7□□□□□ -1.02
PSEN1-215ENST00000556011 C5orf34Q96MH7 638 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 SEMA6CQ9H3T2 930 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 MLXIPQ9HAP2 919 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 PNMA2Q9UL42 364 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 PPM1HQ9ULR3 514 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 RYR2Q92736 4967 aa8.7□□□□□ -1.02
PSEN1-215ENST00000556011 SONP18583 2426 aaKnown RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 GPR182O15218 404 aa8.69□□□□□ -1.02
PSEN1-215ENST00000556011 SNRPB2P08579 225 aaKnown RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 NBPF7P0C2Y1 421 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 MYCLP12524 364 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 RARGP13631 454 aa8.69□□□□□ -1.02
PSEN1-215ENST00000556011 HNRNPLP14866 589 aaKnown RBP eCLIP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 CDK8P49336 464 aa8.69□□□□□ -1.02
PSEN1-215ENST00000556011 FOXD4Q12950 439 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 PRSS36Q5K4E3 855 aa8.69□□□□□ -1.02
PSEN1-215ENST00000556011 AXDND1Q5T1B0 1012 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 NAIF1Q69YI7 327 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 FAM43BQ6ZT52 329 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 KANSL1Q7Z3B3 1105 aa8.69□□□□□ -1.02
PSEN1-215ENST00000556011 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
PSEN1-215ENST00000556011 ZNF598Q86UK7 904 aaKnown RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 C9orf43Q8TAL5 461 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 ZSCAN18Q8TBC5 510 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 CHURC1Q8WUH1 139 aa8.69□□□□□ -1.02
PSEN1-215ENST00000556011 OSBP2Q969R2 916 aa8.69□□□□□ -1.02
PSEN1-215ENST00000556011 TRPV4Q9HBA0 871 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms