RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CREMQ03060 361 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 STIM1Q13586 685 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 MORC3Q14149 939 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 USP41Q3LFD5 358 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 HERC4Q5GLZ8 1057 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-215ENST00000555616 GLRA4Q5JXX5 417 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 ZNF658Q5TYW1 1059 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-215ENST00000555616 ALKAL1Q6UXT8 129 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 STXBP4Q6ZWJ1 553 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 ZBTB33Q86T24 672 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 MAP4K3Q8IVH8 894 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 MYCT1Q8N699 235 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 MLKLQ8NB16 471 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 RABGGTAQ92696 567 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 FBXL18Q96ME1 805 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 UROC1Q96N76 676 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 NECTIN4Q96NY8 510 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 TCHPQ9BT92 498 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 ST6GALNAC4Q9H4F1 302 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 SFXN1Q9H9B4 322 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.49□□□□□ -0.73
ACTN1-215ENST00000555616 CNTN3Q9P232 1028 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 TBX20Q9UMR3 447 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 C5orf42Q9H799 3197 aa10.49□□□□□ -0.73
ACTN1-215ENST00000555616 C2CD2LO14523 706 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 HNRNPDLO14979 420 aaKnown RBP10.48□□□□□ -0.73
ACTN1-215ENST00000555616 CLDN3O15551 220 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 TADA2AO75478 443 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 KIF20AO95235 890 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 PAPLNO95428 1278 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 HARSP12081 509 aaKnown RBP10.48□□□□□ -0.73
ACTN1-215ENST00000555616 KCNA4P22459 653 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 KLRC2P26717 231 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 OSTNP61366 133 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 GTF2BQ00403 316 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 SOX4Q06945 474 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-215ENST00000555616 ELAVL2Q12926 359 aaKnown RBP10.48□□□□□ -0.73
ACTN1-215ENST00000555616 CT47A1Q5JQC4 288 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-215ENST00000555616 RTP2Q5QGT7 225 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 FAM26FQ5R3K3 315 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 ISM2Q6H9L7 571 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 KIAA1841Q6NSI8 718 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 CES5AQ6NT32 575 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 SFR1Q86XK3 245 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 HASPINQ8TF76 798 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 PIK3R5Q8WYR1 880 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 ZBTB45Q96K62 511 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-215ENST00000555616 B3GALT6Q96L58 329 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 ZMAT2Q96NC0 199 aaKnown RBP10.48□□□□□ -0.73
ACTN1-215ENST00000555616 ACAP3Q96P50 834 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 FUCA2Q9BTY2 467 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 APOL5Q9BWW9 433 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 HAPLN2Q9GZV7 340 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 EPHX3Q9H6B9 360 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 OLFML3Q9NRN5 406 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 SLC38A7Q9NVC3 462 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 FNIP2Q9P278 1114 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 CDH22Q9UJ99 828 aa10.48□□□□□ -0.73
ACTN1-215ENST00000555616 GOLGA6L3A6NEY3 463 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 DCXO43602 365 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 FAM189A1O60320 539 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 PPP1R37O75864 691 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 GLUD1P00367 558 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 CLTAP09496 248 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 ALADP13716 330 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 MTHFRP42898 656 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 LIG4P49917 911 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 CLCNKBP51801 687 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 EHHADHQ08426 723 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 ALCAMQ13740 583 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 KYAT1Q16773 422 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 UPP1Q16831 310 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 DPCR1Q3MIW9 517 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 ANO6Q4KMQ2 910 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 RARS2Q5T160 578 aaKnown RBP10.47□□□□□ -0.73
ACTN1-215ENST00000555616 CD300LGQ6UXG3 332 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-215ENST00000555616 RNF135Q8IUD6 432 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 C3orf58Q8NDZ4 430 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 CMASQ8NFW8 434 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-215ENST00000555616 RIN2Q8WYP3 895 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-215ENST00000555616 HVCN1Q96D96 273 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 BICD1Q96G01 975 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 DDX27Q96GQ7 796 aaKnown RBP10.47□□□□□ -0.73
ACTN1-215ENST00000555616 RIPOR3Q96MK2 946 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 TTPALQ9BTX7 342 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 RHOBTB2Q9BYZ6 727 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 POMKQ9H5K3 350 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 MRPL44Q9H9J2 332 aaKnown RBP10.47□□□□□ -0.73
ACTN1-215ENST00000555616 GOLGA2P5Q9HBQ8 144 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 C11orf16Q9NQ32 467 aa10.47□□□□□ -0.73
ACTN1-215ENST00000555616 A0A0B4J269 797 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 TTC26A0AVF1 554 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 PSMA7O14818 248 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 B3GAT3O94766 335 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 GCNT3O95395 438 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 CXCL8P10145 99 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 FGFR3P22607 806 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 NMT1P30419 496 aaKnown RBP10.46□□□□□ -0.73
ACTN1-215ENST00000555616 SLC10A6Q3KNW5 377 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms