RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TSHZ3Q63HK5 1081 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 OTUD7BQ6GQQ9 843 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 FBXO42Q6P3S6 717 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 CCAR1Q8IX12 1150 aaKnown RBP6.86□□□□□ -1.31
VRK1-203ENST00000555067 CMIPQ8IY22 773 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 TMEM132CQ8N3T6 1108 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 FAM98AQ8NCA5 519 aaKnown RBP6.86□□□□□ -1.31
VRK1-203ENST00000555067 FBXO18Q8NFZ0 1043 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 ADI1Q9BV57 179 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 HOMER2Q9NSB8 354 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 TMEM140Q9NV12 185 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 MAST3O60307 1309 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 ELANEP08246 267 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
VRK1-203ENST00000555067 CXCR5P32302 372 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 MCAMP43121 646 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 TMPRSS15P98073 1019 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 PPP3CAQ08209 521 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 STAT4Q14765 748 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 LCE1AQ5T7P2 110 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 B3GNTL1Q67FW5 361 aaPredicted RBP6.85□□□□□ -1.31
VRK1-203ENST00000555067 TICAM2Q86XR7 235 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 PRPF38AQ8NAV1 312 aaKnown RBP6.85□□□□□ -1.31
VRK1-203ENST00000555067 FUBP1Q96AE4 644 aaKnown RBP6.85□□□□□ -1.31
VRK1-203ENST00000555067 ALOXE3Q9BYJ1 711 aa6.85□□□□□ -1.31
VRK1-203ENST00000555067 TESQ9UGI8 421 aaKnown RBP6.85□□□□□ -1.31
VRK1-203ENST00000555067 A0A1B0GTW7 788 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 FAM171A2A8MVW0 826 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 PRC1O43663 620 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 GCSHP23434 173 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 ALDH1A3P47895 512 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 SRSF2Q01130 221 aaKnown RBP6.84□□□□□ -1.31
VRK1-203ENST00000555067 OCA2Q04671 838 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 SCAPQ12770 1279 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 RAVER1Q8IY67 606 aaKnown RBP6.84□□□□□ -1.31
VRK1-203ENST00000555067 FAM43AQ8N2R8 423 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 NELL1Q92832 810 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 BOD1Q96IK1 185 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 VTA1Q9NP79 307 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 DMRT3Q9NQL9 472 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 TMEM74BQ9NUR3 256 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 C14orf119Q9NWQ9 140 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 KCNE5Q9UJ90 142 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 EID1Q9Y6B2 187 aa6.84□□□□□ -1.31
VRK1-203ENST00000555067 ARHGEF17Q96PE2 2063 aaPredicted RBP6.83□□□□□ -1.32
VRK1-203ENST00000555067 SPATA31A6Q5VVP1 1343 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 CDKN1CP49918 316 aaPredicted RBP6.83□□□□□ -1.32
VRK1-203ENST00000555067 RHBDL3P58872 404 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 MGAT2Q10469 447 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 UBXN2BQ14CS0 331 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 NOMO1Q15155 1222 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 EPHA10Q5JZY3 1008 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 SEM1Q6ZVN7 128 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 KRT26Q7Z3Y9 468 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 SLC44A3Q8N4M1 653 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 UBE2Q2Q8WVN8 375 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 CYFIP2Q96F07 1278 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 AHCYL2Q96HN2 611 aaKnown RBP6.83□□□□□ -1.32
VRK1-203ENST00000555067 ZSWIM1Q9BR11 485 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 CCM2LQ9NUG4 571 aaPredicted RBP6.83□□□□□ -1.32
VRK1-203ENST00000555067 GEMIN8Q9NWZ8 242 aaKnown RBP6.83□□□□□ -1.32
VRK1-203ENST00000555067 DNAJC28Q9NX36 388 aa6.83□□□□□ -1.32
VRK1-203ENST00000555067 AJAP1Q9UKB5 411 aaPredicted RBP6.83□□□□□ -1.32
VRK1-203ENST00000555067 WNT10BO00744 389 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 EIF3JO75822 258 aaKnown RBP6.82□□□□□ -1.32
VRK1-203ENST00000555067 EYA4O95677 639 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 ALAS1P13196 640 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 FGFR4P22455 802 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 MPLP40238 635 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 CXADRP78310 365 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 ZNF529Q6P280 563 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 GPR149Q86SP6 731 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 SPATS2Q86XZ4 545 aaKnown RBP6.82□□□□□ -1.32
VRK1-203ENST00000555067 SIMC1Q8NDZ2 872 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 RNF31Q96EP0 1072 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 CCDC136Q96JN2 1154 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 C8orf48Q96LL4 319 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 FAM126AQ9BYI3 521 aaPredicted RBP6.82□□□□□ -1.32
VRK1-203ENST00000555067 GALNT9Q9HCQ5 603 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 ALG13Q9NP73 1137 aaKnown RBP6.82□□□□□ -1.32
VRK1-203ENST00000555067 TBCCD1Q9NVR7 557 aa6.82□□□□□ -1.32
VRK1-203ENST00000555067 GPR32O75388 356 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 GPANK1O95872 356 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 GPR3P46089 330 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 MTNR1BP49286 362 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 ELLP55199 621 aaPredicted RBP6.81□□□□□ -1.32
VRK1-203ENST00000555067 BRDTQ58F21 947 aaPredicted RBP6.81□□□□□ -1.32
VRK1-203ENST00000555067 ZNF362Q5T0B9 420 aaPredicted RBP6.81□□□□□ -1.32
VRK1-203ENST00000555067 FOXR2Q6PJQ5 311 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.81□□□□□ -1.32
VRK1-203ENST00000555067 CAGE1Q8TC20 777 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 TSR2Q969E8 191 aaKnown RBP6.81□□□□□ -1.32
VRK1-203ENST00000555067 Q96MF0 132 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 LDAHQ9H6V9 325 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 SIK3Q9Y2K2 1263 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 ATP8A1Q9Y2Q0 1164 aa6.81□□□□□ -1.32
VRK1-203ENST00000555067 GPR39O43194 453 aa6.8□□□□□ -1.32
VRK1-203ENST00000555067 GSPT1P15170 499 aaKnown RBP6.8□□□□□ -1.32
VRK1-203ENST00000555067 POU3F3P20264 500 aaPredicted RBP6.8□□□□□ -1.32
VRK1-203ENST00000555067 FPR1P21462 350 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms