RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 TMEM132AQ24JP5 1023 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 LIN9Q5TKA1 542 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 FAM171A1Q5VUB5 890 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 PHLDB3Q6NSJ2 640 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 LARP4BQ92615 738 aaKnown RBP15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 NACC1Q96RE7 527 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 SEMA4AQ9H3S1 761 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 MAGEF1Q9HAY2 307 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 POLIQ9UNA4 740 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 SPTBN4Q9H254 2564 aa15.35■□□□□ 0.05
SPTLC2-202ENST00000554365 FAM186AA6NE01 2351 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 KIF4AO95239 1232 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 PLA2G4BP0C869 781 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 CASP1P29466 404 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 TUSC3Q13454 348 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 PSMD5Q16401 504 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 CAMK4Q16566 473 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 PPM1LQ5SGD2 360 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 CCDC183Q5T5S1 534 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 PARM1Q6UWI2 310 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 RBM43Q6ZSC3 357 aaKnown RBP15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 ZBTB8OSQ8IWT0 167 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 SYT2Q8N9I0 419 aaPredicted RBP15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 PIK3R5Q8WYR1 880 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 FGF14Q92915 247 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 HINFPQ9BQA5 517 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 CLSTN3Q9BQT9 956 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 TTPALQ9BTX7 342 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 RPP25Q9BUL9 199 aaKnown RBP15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 FOXQ1Q9C009 403 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 SLC2A4RGQ9NR83 387 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 PRMT7Q9NVM4 692 aaPredicted RBP15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 SNTG2Q9NY99 539 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 FBXW11Q9UKB1 542 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 DNM3Q9UQ16 869 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 ZFP37Q9Y6Q3 630 aaPredicted RBP15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 ZMYM2Q9UBW7 1377 aa15.34■□□□□ 0.05
SPTLC2-202ENST00000554365 MYMKA6NI61 221 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 CCL16O15467 120 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 THP07101 528 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 C8AP07357 584 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 HNRNPA1P09651 372 aaKnown RBP eCLIP15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 SP9P0CG40 484 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 XRCC6P12956 609 aaKnown RBP eCLIP15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 AFMP43652 599 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 GPC5P78333 572 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 ARSHQ5FYA8 562 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 ZC3H14Q6PJT7 736 aaKnown RBP15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 C1orf210Q8IVY1 113 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 KIAA2013Q8IYS2 634 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 CEP57L1Q8IYX8 460 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 PJA1Q8NG27 643 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 LNX1Q8TBB1 728 aaPredicted RBP15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 PRIMPOLQ96LW4 560 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 BHMT2Q9H2M3 363 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 TNMDQ9H2S6 317 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 DLGAP2Q9P1A6 1054 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 CDH7Q9ULB5 785 aa15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 MTCL1Q9Y4B5 1905 aaKnown RBP15.33■□□□□ 0.04
SPTLC2-202ENST00000554365 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 PTGESO14684 152 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 N4BP3O15049 544 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 LRRN2O75325 713 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 CYP11B2P19099 503 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 DPYDQ12882 1025 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 PNOCQ13519 176 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 POSTNQ15063 836 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 CNNM4Q6P4Q7 775 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 SV2BQ7L1I2 683 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 MCPH1Q8NEM0 835 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 SHDQ96IW2 340 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 C7orf25Q9BPX7 421 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 RUSC1Q9BVN2 902 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 TRIM9Q9C026 710 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 CXCL16Q9H2A7 254 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 FZD8Q9H461 694 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 PDZD7Q9H5P4 517 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 USP20Q9Y2K6 914 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 DOCK8Q8NF50 2099 aa15.32■□□□□ 0.04
SPTLC2-202ENST00000554365 ADAM12O43184 909 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 XYLBO75191 536 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 RECQL4O94761 1208 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 GLULP15104 373 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 PRPF4BQ13523 1007 aaKnown RBP15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 CUL4BQ13620 913 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 DHX8Q14562 1220 aaKnown RBP15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 CDCA2Q69YH5 1023 aaPredicted RBP15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 RINT1Q6NUQ1 792 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 C1orf186Q6ZWK4 172 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 MTSS1LQ765P7 747 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 GPBP1Q86WP2 473 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 SPATA20Q8TB22 786 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 ITFG1Q8TB96 612 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 SLC7A14Q8TBB6 771 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 FGF13Q92913 245 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 DNAJC19Q96DA6 116 aa15.31■□□□□ 0.04
SPTLC2-202ENST00000554365 ADPGKQ9BRR6 497 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms