RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CMASQ8NFW8 434 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-211ENST00000554310 HDAC7Q8WUI4 952 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 ACCSQ96QU6 501 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 APOL5Q9BWW9 433 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 RPF1Q9H9Y2 349 aaKnown RBP14.22□□□□□ -0.13
SHMT2-211ENST00000554310 MAN1C1Q9NR34 630 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 CPSF3Q9UKF6 684 aaKnown RBP14.22□□□□□ -0.13
SHMT2-211ENST00000554310 UBQLN1Q9UMX0 589 aaKnown RBP14.22□□□□□ -0.13
SHMT2-211ENST00000554310 PCDHB13Q9Y5F0 798 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 ANKRD63C9JTQ0 380 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 POLR2DO15514 142 aaKnown RBP14.21□□□□□ -0.13
SHMT2-211ENST00000554310 XPOTO43592 962 aaKnown RBP14.21□□□□□ -0.13
SHMT2-211ENST00000554310 ADRB2P07550 413 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 CYP3A5P20815 502 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 ASIC1P78348 528 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 POU5F1Q01860 360 aaKnown RBP14.21□□□□□ -0.13
SHMT2-211ENST00000554310 POSTNQ15063 836 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 ZBTB41Q5SVQ8 909 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 ADALQ6DHV7 355 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 PRSS55Q6UWB4 352 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-211ENST00000554310 CD300LGQ6UXG3 332 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 C15orf39Q6ZRI6 1047 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 STXBP4Q6ZWJ1 553 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 LNX1Q8TBB1 728 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-211ENST00000554310 C18orf25Q96B23 403 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-211ENST00000554310 KIF12Q96FN5 646 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 SPATA32Q96LK8 384 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 C1QTNF1Q9BXJ1 281 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 RHOBTB2Q9BYZ6 727 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 PLEKHA4Q9H4M7 779 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 TBC1D7Q9P0N9 293 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 TUBGCP4Q9UGJ1 667 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 NUB1Q9Y5A7 615 aa14.21□□□□□ -0.13
SHMT2-211ENST00000554310 TISP43B9A030 160 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 PI4K2BG5E9Z4 385 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 SYN3O14994 580 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 MYBP10242 640 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 ALADP13716 330 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 RPL17P18621 184 aaKnown RBP14.2□□□□□ -0.14
SHMT2-211ENST00000554310 LRPAP1P30533 357 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 CASP5P51878 434 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 ATAT1Q5SQI0 421 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 CYP26C1Q6V0L0 522 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 ANKS3Q6ZW76 656 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 GPR149Q86SP6 731 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 C12orf76Q8N812 135 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-211ENST00000554310 LEO1Q8WVC0 666 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-211ENST00000554310 POMGNT1Q8WZA1 660 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 STAMQ92783 540 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 KHSRPQ92945 711 aaKnown RBP eCLIP14.2□□□□□ -0.14
SHMT2-211ENST00000554310 RPGRIP1Q96KN7 1286 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 C7orf25Q9BPX7 421 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 POMKQ9H5K3 350 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 TMEM206Q9H813 350 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 MTRRQ9UBK8 725 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 FBXW11Q9UKB1 542 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 AGO2Q9UKV8 859 aaKnown RBP14.2□□□□□ -0.14
SHMT2-211ENST00000554310 KCNH3Q9ULD8 1083 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 DERAQ9Y315 318 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 NR2E1Q9Y466 385 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 BACE2Q9Y5Z0 518 aa14.2□□□□□ -0.14
SHMT2-211ENST00000554310 LACTBL1A8MY62 500 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 TGM5O43548 720 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 DCXO43602 365 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 PAPLNO95428 1278 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 TKTP29401 623 aaKnown RBP14.19□□□□□ -0.14
SHMT2-211ENST00000554310 BRCC3P46736 316 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 SPAG1Q07617 926 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 KCNA1Q09470 495 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 ZBTB6Q15916 424 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 KLHL40Q2TBA0 621 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 LILRA6Q6PI73 481 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 TMC5Q6UXY8 1006 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 PALB2Q86YC2 1186 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 GLYCTKQ8IVS8 523 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 CEP57L1Q8IYX8 460 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 SYCP3Q8IZU3 236 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 SUSD3Q96L08 255 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 CLSTN3Q9BQT9 956 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 FGFBP2Q9BYJ0 223 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 SCAND2PQ9GZW5 306 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-211ENST00000554310 ASB7Q9H672 318 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 LMBRD1Q9NUN5 540 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 ZDHHC7Q9NXF8 308 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 CDH22Q9UJ99 828 aa14.19□□□□□ -0.14
SHMT2-211ENST00000554310 UBE4BO95155 1302 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 I3L4J1 428 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 EIF3DO15371 548 aaKnown RBP eCLIP14.18□□□□□ -0.14
SHMT2-211ENST00000554310 WEE2P0C1S8 567 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 GARTP22102 1010 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 CMA1P23946 247 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 IGFBP6P24592 240 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-211ENST00000554310 ADSSP30520 456 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 ACOT2P49753 483 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 FAM26FQ5R3K3 315 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 LIN9Q5TKA1 542 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 JADE1Q6IE81 842 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 CCDC149Q6ZUS6 474 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 UNC13DQ70J99 1090 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 RNF135Q8IUD6 432 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms