RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 RECQL4O94761 1208 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 SEC24AO95486 1093 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 PSMC3P17980 439 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 CCNE1P24864 410 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 GDI1P31150 447 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 VIPR2P41587 438 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
PRKCH-208ENST00000553846 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 EPHA7Q15375 998 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 CCDC6Q16204 474 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 IL31Q6EBC2 164 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 TCEAL8Q8IYN2 117 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 HACE1Q8IYU2 909 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 DEPDC1BQ8WUY9 529 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 FAM20AQ96MK3 541 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 LRRC3BQ96PB8 259 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 C22orf23Q9BZE7 217 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 TRIM6Q9C030 488 aaPredicted RBP10.05□□□□□ -0.8
PRKCH-208ENST00000553846 FZD8Q9H461 694 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 PDZD7Q9H5P4 517 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
PRKCH-208ENST00000553846 MYBPHLA2RUH7 354 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 DKC1O60832 514 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRKCH-208ENST00000553846 SLITRK3O94933 977 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 THP07101 528 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 PTPN2P17706 415 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 SOX9P48436 509 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 MRPL58Q14197 206 aaKnown RBP10.04□□□□□ -0.8
PRKCH-208ENST00000553846 UPP1Q16831 310 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 INF2Q27J81 1249 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 AASDHQ4L235 1098 aaPredicted RBP10.04□□□□□ -0.8
PRKCH-208ENST00000553846 XKR9Q5GH70 373 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 PPP4R3AQ6IN85 833 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 PKN3Q6P5Z2 889 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 MFSD6LQ8IWD5 586 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 ZNF461Q8TAF7 563 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 BRF1Q92994 677 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 CHFRQ96EP1 664 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 MSANTD3Q96H12 275 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 DYDC2Q96IM9 177 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 HSD17B14Q9BPX1 270 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 MKNK1Q9BUB5 465 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 SLC26A6Q9BXS9 759 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 LRRC3Q9BY71 257 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 CCDC113Q9H0I3 377 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 ARRDC1-AS1Q9H2J1 176 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 ZSWIM4Q9H7M6 989 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
PRKCH-208ENST00000553846 SNTG2Q9NY99 539 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 CEP72Q9P209 647 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 PARP2Q9UGN5 583 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 INSL5Q9Y5Q6 135 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 MAST4O15021 2626 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 KIAA1549LQ6ZVL6 1849 aa10.04□□□□□ -0.8
PRKCH-208ENST00000553846 CCDC163A0A0D9SF12 145 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 SRRM3A6NNA2 597 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-208ENST00000553846 I3L4J1 428 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 GIPC1O14908 333 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 TBX3O15119 743 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 ABCB7O75027 752 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 DGAT1O75907 488 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 VNN2O95498 520 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 ATF2P15336 505 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 CTHP32929 405 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 RARRES1P49788 294 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 CLCNKBP51801 687 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 NLRP5P59047 1200 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 CYP4A11Q02928 519 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 SOX4Q06945 474 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-208ENST00000553846 TFDP1Q14186 410 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 CTTNQ14247 550 aaKnown RBP10.03□□□□□ -0.8
PRKCH-208ENST00000553846 HEATR6Q6AI08 1181 aaKnown RBP10.03□□□□□ -0.8
PRKCH-208ENST00000553846 PSAPL1Q6NUJ1 521 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 Q6ZUG5 572 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 ANKS3Q6ZW76 656 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 KBTBD6Q86V97 674 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 TMC8Q8IU68 726 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 HS6ST3Q8IZP7 471 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 BLIDQ8IZY5 108 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 FAM177A1Q8N128 213 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-208ENST00000553846 GAB3Q8WWW8 586 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 ZC3H10Q96K80 434 aaKnown RBP10.03□□□□□ -0.8
PRKCH-208ENST00000553846 AIFM3Q96NN9 605 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 CORO1BQ9BR76 489 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 SMOC1Q9H4F8 434 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 PCDHGA5Q9Y5G8 931 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 KALRNO60229 2985 aa10.03□□□□□ -0.8
PRKCH-208ENST00000553846 ASCC3Q8N3C0 2202 aaKnown RBP10.02□□□□□ -0.81
PRKCH-208ENST00000553846 TMEM8BA6NDV4 472 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 SLC38A8A6NNN8 435 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 HEPACAM2A8MVW5 462 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 SPECC1L-ADORA2AF8WAN1 911 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 AXIN1O15169 862 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 CHADO15335 359 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-208ENST00000553846 EXTL3O43909 919 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 B3GAT3O94766 335 aa10.02□□□□□ -0.81
PRKCH-208ENST00000553846 TOP3BO95985 862 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms